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shufangwu / DeePhage

A tool for distinguish temperate phage-derived and virulent phage-derived sequence in metavirome data using deep learning
GNU Lesser General Public License v3.0
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Some questions about accuracy #2

Open ZongzhiWu opened 2 years ago

ZongzhiWu commented 2 years ago

Dear Shufang, I have some questions about the accuracy of DeePhage, after completing the test on example.fna. My test results were shown as following picture. For the virulent_phage1, 7 of 10 CDS sequences were classified as temperate. (It seems a wrong classification?) For the temperate_phage1, 2 of 10 CDS sequences were classified as virulent. (This seems more acceptable) image Maybe the software has a stronger preference for Temperate virus?

shufangwu commented 1 year ago

Thanks for your attention. Your result seemed a wrong classification. Was it run by Docker or a virtual machine?

xu-j1234566 commented 5 months ago

do you resolve this problem? I got the same reult. result