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shuzhao-li-lab / asari

asari, metabolomics data preprocessing
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facing error using asari dashboard #34

Closed amnahsiddiqa closed 1 year ago

amnahsiddiqa commented 1 year ago

I am trying to run asari dashboard using v 1.11.0 and facing error:

...

 from .decomposition import *
  File "/Users/siddia/opt/anaconda3/lib/python3.9/site-packages/networkx/algorithms/tree/decomposition.py", line 6, in <module>
    from networkx.algorithms import chordal_graph_cliques, complete_to_chordal_graph, moral
ImportError: cannot import name 'complete_to_chordal_graph' from partially initialized module 'networkx.algorithms' (most likely due to a circular import) (/Users/siddia/opt/anaconda3/lib/python3.9/site-packages/networkx/algorithms/__init__.py)
shuzhao-li commented 1 year ago

Change your networkx version. This has nothing to do with asari.