We need to add method to the GWASDataLoader class to read pre-computed summary statistics that can be obtained from other software tools (e.g. PLINK). The method should take either one big file and break into different chromosomes or 1 file per chromosome (as we do with the genotypes).
We need to add method to the
GWASDataLoader
class to read pre-computed summary statistics that can be obtained from other software tools (e.g.PLINK
). The method should take either one big file and break into different chromosomes or 1 file per chromosome (as we do with the genotypes).Sample summary statistics files can be found here: independent_sumstats.
Method signature is already written: