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si-medbif / exomeseq

Analysing sequence data from whole exome sequencing or targeted gene panel sequencing.
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Missing BED file #3

Closed dummai closed 6 years ago

dummai commented 6 years ago

If the pipeline is run without any *.bed, it will return an error, " 'Namespace' object has no attribute 'regions38' ".

The error may be bypassed by adding an empty *.bed file. $ echo "" > sample_name.bed

haraldgrove commented 6 years ago

I've added a check to handle when there is no bed file present. Ran a quick test and it seems to be working. Will close for now.