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sib-swiss / pftools3

A suite of tools to build and search generalized profiles
GNU General Public License v2.0
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pfscanV3 message when run with a single profile #15

Closed gsn7 closed 3 years ago

gsn7 commented 3 years ago

the following message is displayed when you run pfscanV3 with a single profile "pfscanV3 is not meant to be used with a single profile, use pfsearchV3 to get better performance in such case." I would suggest this message should be prefixed with a '#' as pfsearchV3 continues to run and generates results.

smoretti commented 3 years ago

Hi this message goes to stderr, like other error or warning messages. It should not interfere with results that go to stdout.

I can add a '#' but redirect stdout in a file makes more sense for me. This way only error and warning messages are visible directly on the screen.

gsn7 commented 3 years ago

i noticed that it sends the message to stderr after i had created the issue. thanks