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sib-swiss / single-cell-training

SIB course on single cell transcriptomics by mostly using the Seurat pipeline
https://sib-swiss.github.io/single-cell-training/
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Error in validObject(.Object) : invalid class “LogMap” object: superclass "mMatrix" not defined in the environment of the object's class #78

Closed shameem356 closed 3 months ago

shameem356 commented 3 months ago

Hello,

I am getting the following error while running the below script.

Error in validObject(.Object) : invalid class “LogMap” object: superclass "mMatrix" not defined in the environment of the object's class

Script : seu <- Seurat::CreateSeuratObject(counts = sce_data, project = "pbmmc", min.cells = 3, min.features = 100)

shameem356 commented 3 months ago

https://github.com/satijalab/seurat/issues/7986