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sidchop / brainconn

Brainconn - an R package for visualising brain connectivity data in 2D and interactive 3D
https://sidchop.github.io/brainconn/articles/brainconn.html
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Rat atlas #20

Open giseleroch opened 2 years ago

giseleroch commented 2 years ago

Hi, Currently, i am working with brain metabolic networks in rat and i would like to know if it's possible apply the brainncon to plot the brain connectivity data in rat atlas.

Thanks,

sidchop commented 2 years ago

Hi - currently, brainconn only has a human brain background. Is there something like MNI/standard coordinate space for rat brain data? If so, this could be implemented in brainconn, but would require an example atlas with coordinates, and a nice rendering of the rat brain to use as a background. The 3d implementation would require a mesh or .vtk file of a standard rat brain.