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signalbash / how_are_we_stranded_here

Check strandedness of RNA-Seq fastq files
MIT License
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newline characters in Fasta header cause mismatch #7

Closed wowwish closed 2 years ago

wowwish commented 3 years ago

I just encountered a bug where the FASTA header with newline does not match with the BED file ID. I guess the newline needs to be stripped from the header.

boyangzhao commented 3 years ago

yes I have the same problem - I don't if it's the newline or what, but bed id and the fasta header doesn't match, when it should.

signalbash commented 2 years ago

https://github.com/signalbash/how_are_we_stranded_here/commit/0fedf9245c3bbbcdf670e2b374196ca5d40cab25