sigven / pcgr

Personal Cancer Genome Reporter (PCGR)
https://sigven.github.io/pcgr
MIT License
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conda installation issue with ncurses too many levels of symbolic links #213

Closed pdiakumis closed 2 months ago

pdiakumis commented 1 year ago

Reporting this conda installation issue we got via email:

Downloading and Extracting Packages

Preparing transaction: done
Verifying transaction: failed
[Errno 40] Too many levels of symbolic links: '[...]/miniconda3/pkgs/ncurses-6.2-h58526e2_4/share/terminfo/N/NCR260VT300WPP'

It was reported in Nov2020 at https://github.com/conda/conda/issues/10333 and there are several workarounds, but maybe we can explore bumping ncurses from 6.2 to 6.3 in the pcgr conda env to accomodate our users.