sigven / pcgr

Personal Cancer Genome Reporter (PCGR)
https://sigven.github.io/pcgr
MIT License
251 stars 47 forks source link

conda: install openxlsx2 + CNAqc during build stage #226

Closed pdiakumis closed 3 months ago

pdiakumis commented 3 months ago

Trying to see if we can get away with installing openxlsx2 + CNAqc during the conda build stage or if we need to get their (+ their dependencies) condarised. Also I'm hoping we don't have a cyclic dependency issue with pcgrr requiring cpsr and cpsr requiring pcgrr.