Ensure proper exclusion of variants on non-nuclear chromosomes/scaffolds in pcgrr

sigven / pcgr

Personal Cancer Genome Reporter (PCGR)

https://sigven.github.io/pcgr

MIT License

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Closed sigven closed 2 months ago

sigven commented 2 months ago

Exclude M/MT variants properly in reporting step (pcgrr) - if these are present in input somatic VCF, v2.0.0 will fail (ref [#244])
minor update to biomarker docs