Add functionality to enable clicking on individual cells in UMAP

sii-cell-atlas / paraCell

Single-cell analysis web interface, especially geared toward parasitologists. Inherits core functionality of cellxgene and cellxgene VIP for general purpose analysis, with additional features such as advanced gene search, host-parasite interactions, database integration and trajectory inference.

MIT License

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Add functionality to enable clicking on individual cells in UMAP #10

Open haessar opened 2 years ago

haessar commented 2 years ago

Might be worth exploring https://github.com/czbiohub/excellxgene

documentation is a bit light-on-the-ground, but I've found this on PyPI: excellxgene · PyPI "LIDAR graph interaction mode (the airplane) - Show an interactive tooltip describing the cells underneath your cursor. Very helpful for the color impaired or for large datasets with hundreds of labels."

haessar commented 2 years ago

doesn't look like anyone's successfully managed to combine both VIP and excellxgene yet: Combining ExCellxgene with CellxGene VIP · Issue #2471 · chanzuckerberg/cellxgene (github.com)