sii-companion / companion

A genome annotation tool for more than just protists
https://companion.ac.uk/
ISC License
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custom ncRNA models for Infernal #42

Closed haessar closed 1 year ago

haessar commented 1 year ago

Previously NCRNAMODELS was set in loc*.config, which meant that reference-dependent tuning of this parameter was not enabled (e.g. on loc_web.config, all runs were defaulting to kinetoplastid_rnas, even when that wasn't appropriate).

Placing the definition of this parameter in params_default.config instead allows reference-dependent tuning in the web interface by setting the value in companion.yml.