You can specify event related params for each scan group during the initialization of an mr session (eg. when running mrInit2).
However, at the end of mrInit2, the command line output says
"Updated Event Analysis params for Original scans 1" x the number of scans you have.
In other words, it assigns the params you specified only to scan 1.
You can also see this by doing
GLM > Edit Event-Related Parameters (scan group),
which only shows the specified parameters on the first scan of the session.
A workaround seems to be specifying the event related params in the GUI each time you run a GLM. However, this bug should be fixed in order to allow running a GLM to be more fully automated.
You can specify event related params for each scan group during the initialization of an mr session (eg. when running mrInit2).
However, at the end of mrInit2, the command line output says "Updated Event Analysis params for Original scans 1" x the number of scans you have.
In other words, it assigns the params you specified only to scan 1.
You can also see this by doing GLM > Edit Event-Related Parameters (scan group),
which only shows the specified parameters on the first scan of the session.
A workaround seems to be specifying the event related params in the GUI each time you run a GLM. However, this bug should be fixed in order to allow running a GLM to be more fully automated.
Rachel