Where is Windows installer of HTSeq.

[vivekruhela]

As per the documentation of HTSeq, the windows installer is avaialble at HTSeq download page but when I checked it, I see .whl files for only linux and macOS. Can anyone suggest me how to install htseq in windows or where is the windows installer of htseq. Thanks.

[iosonofabio]

Thanks for asking. I don't have a Windows machine so at the moment only osx and Linux are supported.

If you manage to install it on Win, please let me know how do I can add it to the docs

On Tue, Mar 17, 2020, at 15:02, vivekruhela wrote:

As per the documentation of HTSeq, the windows installer is avaialble at HTSeq download page https://pypi.org/project/HTSeq/#files but when I checked it, I see .whl files for only linux and macOS. Can anyone suggest me how to install htseq in windows or where is the windows installer of htseq. Thanks.

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[iosonofabio]

Both

On 3/17/20 5:00 PM, vivekruhela wrote:

Thanks for the reply. Is this tool written in C or in python?

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[vivekruhela]

While building this tool in MinGw64, I am getting an error of missing thread.h and c++11 compiler is requrired (screenshot attached) . I think I am using I am using latest GCC compiler so c++11 error should not come (Am I wrong!!). Can you suggest me how to get thread.h for my window-based compiler. Thanks.

[iosonofabio]

As mentioned, I don't have Windows so I can't help you to well. But try and make sure your GCC supports c++11. What version of gcc are you using?

On Thu, Mar 19, 2020, at 17:38, vivekruhela wrote:

While building this tool in MinGw64, I am getting an error of missing thread.h and c++11 compiler is requrired (screenshot attached) Screenshot (96) https://user-images.githubusercontent.com/13174913/77038629-42a33280-69da-11ea-9f74-d4f458b4d0b8.png . I think I am using I am using latest GCC compiler so c++11 error should not come (Am I wrong!!). Can you suggest me how to get thread.h for my window-based compiler. Thanks.

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[vivekruhela]

Here is the gcc version:

$ gcc --version
gcc.exe (Rev1, Built by MSYS2 project) 9.3.0

[iosonofabio]

I'm not sure how to help you since I don't have minigw or windows myself. In any case, thread.h seems like a very basic header file and is not related directly to HTSeq. Indeed, the compiler is trying to get some perl thing done for bcftool so it seems like you are reporting the issue for the wrong package.

Closing