simonlabcode / bam2bakR

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Catch and handle weird r-utils edge case #20

Closed isaacvock closed 3 months ago

isaacvock commented 3 months ago

One user ran into a case where r-utils seems to have not been installed, leading fread() to fail when trying to load a gzipped file. This could be a bigger conda issue on their end, but there is no reason I can't check for R-utils installation and run read_csv if installation failed.