Closed tseemann closed 5 years ago
Currently Sample adk atpA ddl gdh gyd pstS purK ST
Sample adk atpA ddl gdh gyd pstS purK ST
Any chance making it compatible with mlst? Sample ST adk atpA ddl gdh gyd pstS purK
mlst
Sample ST adk atpA ddl gdh gyd pstS purK
This has the advantage that no matter how many alleles in the scheme, the ST will be consistent.
But I understand that ST is not compulsory, and that this could be used for assaying all sorts of amplicons such as AMR genes.
I can do that. TBH the order I chose was a little arbitrary.
The order has been changed in commit 56babcbfe0cc83ed83bd9bb8e2ef927ef08d6632
Currently
Sample adk atpA ddl gdh gyd pstS purK ST
Any chance making it compatible with
mlst
?Sample ST adk atpA ddl gdh gyd pstS purK
This has the advantage that no matter how many alleles in the scheme, the ST will be consistent.
But I understand that ST is not compulsory, and that this could be used for assaying all sorts of amplicons such as AMR genes.