#CHROM POS ID REF ALT QUAL FILTER INFO
CP006620 3509 . T C . . NS=14;NS5=0,2,0,12,0
CP006620 4634 . A T . . NS=14;NS5=12,0,0,2,0
CP006620 4937 . C T . . NS=14;NS5=0,12,0,2,0
Expected:
#CHROM POS ID REF ALT QUAL FILTER INFO SAMPLE1 SAMPLE2 SAMPLE3 ....
CP006620 3509 . T C . . NS=14;NS5=0,2,0,12,0 GT 1 0 1 0 0 1 2
etc
Got this:
Expected: