search

simonrharris / SKA

Split Kmer Analysis
MIT License
62 stars 1 forks source link

One command for `fasta`, `fastq` and `merge` #3

Open bewt85 opened 6 years ago

bewt85 commented 6 years ago

We had a chat about you combining the following commands:

My thought was that you could have one command:

$ ls
lots_of_samples.kmers
sample_a.kmers
sample_b.fasta
sample_c_1.fastq
sample_c_2.fastq

$ ska add -o lots_of_samples.kmers sample_a.kmers sample_b.fasta sample_c_1.fastq:sample_c_2.fastq