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simslab
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scHPF
Single-cell Hierarchical Poisson Factorization
BSD 2-Clause "Simplified" License
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Error upon preprocessing with scHPF prep
#22
fgv2104
closed
7 months ago
1
Adds support for h5ad Anndata files
#21
ricomnl
opened
2 years ago
0
Unexpected variational shape of inverse budget parameters (xi, eta)
#20
tillahoffmann
closed
3 years ago
1
Extracting/Computing the LLH
#19
ewouddt
opened
3 years ago
0
Alternative to git clone
#18
hmf0103
opened
3 years ago
0
How to reconstruct expression matrix from cell scores and gene scores
#17
iUser1234
opened
4 years ago
0
Batching
#16
hannaml
closed
4 years ago
0
How to get top ranked genes in each module?
#15
zhumengyan
closed
4 years ago
1
Preprocessing of scHPF
#14
AstreChen
opened
4 years ago
2
Posterior predictive checks?
#13
mjbroerman
opened
4 years ago
1
Docs
#12
hannaml
closed
5 years ago
0
Loss fnc
#11
hannaml
closed
5 years ago
0
changing hyperparameters (a and c) to change sparsity of factors
#10
vitkl
closed
3 years ago
2
ImportError: cannot import name 'logsumexp' from 'scipy.misc'
#9
vitkl
closed
5 years ago
2
How to deal with batch effects?
#8
jenzopr
opened
5 years ago
2
patch loom error
#7
hannaml
closed
5 years ago
0
remove errant option
#6
hannaml
closed
5 years ago
0
Dev
#5
hannaml
closed
5 years ago
0
Dev
#4
hannaml
closed
5 years ago
0
Memory usage
#3
davek44
closed
5 years ago
5
Make scHPF a package
#2
aksarkar
closed
6 years ago
1
Pytorch implementation
#1
rfarouni
opened
6 years ago
4