simularium / simulariumio

Python package that converts simulation outputs to the format consumed by the Simularium viewer website
Apache License 2.0
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Version compatibility conflict with cellpack and simularium (local development) #182

Open advaitathreya opened 6 months ago

advaitathreya commented 6 months ago

System and Software

Description

Running just install results in the below error.

INFO: pip is looking at multiple versions of cellpack to determine which version is compatible with other requirements. This could take a while.
ERROR: Cannot install simulariumio, simulariumio 0.1.dev651+gfd90e98 (from simulariumio) and simulariumio[cellpack,dev,docs,lint,mcell,md,physicell,test]==0.1.dev651+gfd90e98 because these package versions have conflicting dependencies.

The conflict is caused by:
    The user requested simulariumio 0.1.dev651+gfd90e98 (from simulariumio)
    simulariumio[cellpack,dev,docs,lint,mcell,md,physicell,test] 0.1.dev651+gfd90e98 depends on simulariumio 0.1.dev651+gfd90e98 (from simulariumio)
    cellpack 1.0.3 depends on simulariumio>=1.2.0

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts
error: Recipe `install` failed on line 26 with exit code 1

I'm getting around it by manually running pip install -e ".[lint,test,docs,dev,mcell,physicell,md]".

Expected Behavior

I'm assuming this circular dependency was unintentional?