As a stakeholder, I want to see a visualized demonstration of simulating actin fibers in different engines as a proof of concept.
Acceptance Criteria
A simularium file with the results of running a model in MEDYAN, cropping part of it and running it in ReaDDy, and then running the result in MEDYAN again.
A simularium file with the results of running a model in Cytosim, switching to MEDYAN, and then running the result in Cytosim again.
Details
This requires:
Vivarium processes for ReaDDy, MEDYAN, and Cytosim with matching ports to switch between monomer and fiber scales
Use Case
As a stakeholder, I want to see a visualized demonstration of simulating actin fibers in different engines as a proof of concept.
Acceptance Criteria
A simularium file with the results of running a model in MEDYAN, cropping part of it and running it in ReaDDy, and then running the result in MEDYAN again.
A simularium file with the results of running a model in Cytosim, switching to MEDYAN, and then running the result in Cytosim again.
Details
This requires: