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shapeit4_full_allsnp (28792) missing one sample
#16
sinanshi
opened
5 years ago
1
The switch error results differ in two dataset.
#15
sinanshi
opened
5 years ago
2
Phasing - should divide the chunk by Mb instead of number of sites.
#14
sinanshi
opened
5 years ago
0
Why so many flips?
#13
sinanshi
opened
5 years ago
0
SHAPEIT2 worse accuracy than SHAPEIT4?
#12
sinanshi
opened
5 years ago
0
flip switch rate above 50%?
#11
sinanshi
closed
5 years ago
1
liftover 10292 b37 samples
#10
sinanshi
opened
5 years ago
0
Diary
#9
sinanshi
opened
5 years ago
1
multi-allelic using bcftools norm
#8
sinanshi
opened
5 years ago
0
full vanilla shapeit4 re-test
#7
sinanshi
opened
5 years ago
1
High mendelean error
#6
sinanshi
opened
5 years ago
3
GEL sequencing data SHAPEIT4 testing
#5
sinanshi
opened
5 years ago
1
singleton
#4
sinanshi
opened
5 years ago
1
Flip rate
#3
sinanshi
closed
5 years ago
1
Merge all samples to a single file - chr22
#2
sinanshi
closed
5 years ago
3
VCF subsetting results empty.
#1
sinanshi
closed
6 years ago
0