:leaves: SiNGA (Simulation of Natural Systems using Graph Automata) is an open-source library containing tools especially for structural bioinformatics and systems biology.
Subunits should be needed to calculate diffusion speed. Lots of proteins are naturally occurring as dimers or similar. This should be parsed and used to calculate something as effective weight.
Information can be found on the uniprot.
probably a simulation module needs to be implemented to combine subunits after they have been translated in their usual singular form, to create the functional enzyme
diffusion is indirectly affected by not considering this problem all enzymes currently have a weight based on the mass of the amino acid sequence
Implemented complex building reactions that enable this. Further Complexed Chemical Entities can be used to statically combine entities to complex entities. Considered as resolved as of ee70cbf.
Subunits should be needed to calculate diffusion speed. Lots of proteins are naturally occurring as dimers or similar. This should be parsed and used to calculate something as effective weight.