assignment rules can also be applied to parameters

singa-bio / singa

:leaves: SiNGA (Simulation of Natural Systems using Graph Automata) is an open-source library containing tools especially for structural bioinformatics and systems biology.

MIT License

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assignment rules can also be applied to parameters #54

Closed cleberecht closed 5 years ago

cleberecht commented 7 years ago

for now they can only be used to reference entities

cleberecht commented 5 years ago

Assignment rules are a concept of SBML. Timed initialization of concentrations will be a part of the ConcentrationInitializer. I am not a super fan of changing kinetic parameters during simulation, this can always be handled using alternative strategies.