single-cell-data / TileDB-SOMA

Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
MIT License
79 stars 21 forks source link

[python] Remove tiledb-py from top-level src (sans `io` and `options`) 5/5 #2740

Closed nguyenv closed 3 weeks ago

nguyenv commented 3 weeks ago

Issue and/or context:

This is on top of https://github.com/single-cell-data/TileDB-SOMA/pull/2736

This removes import tiledb from apis/python/src but not in io or options which will be done in subsequent PRs.

Changes:

codecov[bot] commented 3 weeks ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Please upload report for BASE (main@a4c1eb8). Learn more about missing BASE report.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #2740 +/- ## ======================================= Coverage ? 90.02% ======================================= Files ? 37 Lines ? 3939 Branches ? 0 ======================================= Hits ? 3546 Misses ? 393 Partials ? 0 ``` | [Flag](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/2740/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | Coverage Δ | | |---|---|---| | [python](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/2740/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `90.02% <ø> (?)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data#carryforward-flags-in-the-pull-request-comment) to find out more. | [Components](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/2740/components?src=pr&el=components&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | Coverage Δ | | |---|---|---| | [python_api](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/2740/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `90.02% <ø> (?)` | | | [libtiledbsoma](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/2740/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `∅ <ø> (?)` | |