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single-cell-data / TileDB-SOMA

Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
https://tiledbsoma.readthedocs.io
MIT License
90 stars 25 forks source link

[python] Use `somacore` 1.0.16 #3035

Closed johnkerl closed 3 weeks ago

johnkerl commented 3 weeks ago

https://github.com/single-cell-data/TileDB-SOMA/issues/2141 sc-41048

johnkerl commented 3 weeks ago

Weird that CI isn't finding somacore 1.0.16 b/c https://pypi.org/project/somacore/1.0.16/#files definitely exists (> 30 minutes now) ...

And I ran pip install somacore==1.0.16 successfully on my laptop just now ... 🤔

johnkerl commented 3 weeks ago

Derp, PEBKAC :) -- needs #3021

codecov[bot] commented 3 weeks ago

Codecov Report

Attention: Patch coverage is 57.14286% with 3 lines in your changes missing coverage. Please review.

Project coverage is 89.94%. Comparing base (d1f401d) to head (d09a911). Report is 11 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #3035 +/- ## ========================================== + Coverage 89.64% 89.94% +0.29% ========================================== Files 40 41 +1 Lines 4096 4107 +11 ========================================== + Hits 3672 3694 +22 + Misses 424 413 -11 ``` | [Flag](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/3035/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | Coverage Δ | | |---|---|---| | [python](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/3035/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `89.94% <57.14%> (+0.29%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data#carryforward-flags-in-the-pull-request-comment) to find out more. | [Components](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/3035/components?src=pr&el=components&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | Coverage Δ | | |---|---|---| | [python_api](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/3035/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `89.94% <57.14%> (+0.29%)` | :arrow_up: | | [libtiledbsoma](https://app.codecov.io/gh/single-cell-data/TileDB-SOMA/pull/3035/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=single-cell-data) | `∅ <ø> (∅)` | |