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single-cell-data / TileDB-SOMA

Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
https://tiledbsoma.readthedocs.io
MIT License
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[r] Use libtiledbsoma for schema evolution #3057

Closed johnkerl closed 2 weeks ago

johnkerl commented 3 weeks ago

Currently done using the tiledb-r path which we're removing as a dependency.

2406

[sc-55679]

johnkerl commented 2 weeks ago

It looks like I can move this to libtiledbsoma pretty much verbatim https://github.com/single-cell-data/TileDB-SOMA/blob/1.14.2/apis/python/src/tiledbsoma/pytiledbsoma.cc#L139-L204 and then I can re-use that for R.

CC @nguyenv in case I'm missing something