Bug fixes when reading VCF file

single-cell-genetics / vireo

Demultiplexing pooled scRNA-seq data with or without genotype reference

https://vireoSNP.readthedocs.io

Apache License 2.0

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Bug fixes when reading VCF file #10

Closed andr-kun closed 4 years ago

andr-kun commented 4 years ago

I encountered an issue when reading VCF file specified as part of the input list for vartrix. I noticed that this was due to an undeclared variable, likely due to the variable not being renamed during refactoring of the variable.

I also ran code review on the vireo repository and identified a missing dependency in the vireo_wrap_v02.py.

huangyh09 commented 4 years ago

Thanks for the code review and bug fix :)