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singularityhub / singularityhub.github.io

Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
https://singularityhub.github.io
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Improve error message #79

Closed bneron closed 6 years ago

bneron commented 6 years ago

Link to Container Collection Log, Build, or Collection (in that order)

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Behavior when Building Locally

When the section test is name tests by mistake. the error message is not really helpful:

/bin/sh: 0: Can't open s

The complete trace and a singularity recipe to reproduce the behavior Singularity.txt

sudo singularity build foo.img Singularity Using container recipe deffile: Singularity Sanitizing environment Adding base Singularity environment to container Docker image path: index.docker.io/library/ubuntu:zesty Cache folder set to /root/.singularity/docker Exploding layer: sha256:8b23367590c32dbb6954ab3cc9b6c451b9763556c72a893538efe88583f6a5dc.tar.gz Exploding layer: sha256:c7feb578947e4b86e0a0cff64b42489dc1305bbacdb3ed36d0afe95a19ebf845.tar.gz Exploding layer: sha256:ac836f06379c8d7356e0d2e7dbb3e9f3924616527fa51b95545fb455eec31f08.tar.gz Exploding layer: sha256:be286dc472df31f16953d34151f836d0186fddeea6cd56dcefd2a6d46a992500.tar.gz Exploding layer: sha256:5533df5f353d9fbcbd081e9dd653fe7d8ddebed958d1f0e56fa4a87b216f13c1.tar.gz Exploding layer: sha256:f6be9f4f6905406c1e7fd6031ee3104d25ad6a31d10d5e9192e7abf7a21e519a.tar.gz User defined %runscript found! Taking priority. Running post scriptlet Adding deffile section labels to container Adding runscript Adding runscript help Running test scriptlet /bin/sh: 0: Can't open s ABORT: Aborting with RETVAL=255 Cleaning up...

Error on Singularity Hub

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What do you think is going on?

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vsoch commented 6 years ago

Parsing for correctness of the build recipe is something we haven't done yet, and I think it's best to bring up an issue here: https://github.com/singularityware/singularity/issues with Singularity proper. Singularity Hub shouldn't do anything special other than run the build, so if there is an error not being caught (as is above) it should be added there. That way, if you were to do the build locally, the output received would be consistent.

bneron commented 6 years ago

done https://github.com/singularityware/singularity/issues/1097