ENH/CLN: Integration with {broom} - Githubissues

sinhrks / ggfortify

Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages.

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ENH/CLN: Integration with {broom} #17

Open sinhrks opened 9 years ago

sinhrks commented 9 years ago

http://cran.r-project.org/web/packages/broom/index.html

Utilize {broom} as much if outputs data.frame which has enough information for plotting.

[ ] aareg_tidiers
[ ] anova_tidiers
[ ] cch_tidiers
[ ] confint_tidy
[ ] coxph_tidiers
[ ] cv.glmnet_tidiers
[ ] felm_tidiers
[ ] gam_tidiers
[ ] glmnet_tidiers
[ ] lme4_tidiers
[ ] multcomp_tidiers
[ ] nls_tidiers
[ ] pyears_tidiers
[ ] ridgelm_tidiers
[ ] rlm_tidiers
[ ] sexpfit_tidiers
[ ] smooth.spline_tidiers
[ ] sp_tidiers
[ ] survfit_tidiers
[ ] survreg_tidiers
[ ] tidy.manova
[ ] tidy.map
[ ] tidy.TukeyHSD
Affects to backward compat

autoplot should not be affected. Column names output from fortify may be affected.

[ ] kmeans_tidiers
[ ] tidy.density
[ ] tidy.spec
Unable to use
[x] tidy.ts: Doesn't preserve timestamps.
[x] Arima_tidiers: Not usable for autoplot.
[ ] glm_tidiers: fortify is already defined in {ggplot2}. Considering to use autoplot internally for simplification.
[ ] lm_tidiers: Same as glm.
[x] htest_tidiers: Plotting single test result is not very useful. Reconsider if there is good example.
[x] tidy.pairwise.htest: Doesn't contain confidence intervals. Considering to use {pairwiseCI}
[ ] tidy.ftable: No need to use, simply call as.data.frame.

sinhrks commented 8 years ago

May need to revisit this, as ggplot2::fortify may be deprecated in future. broom::augment will be a successor?

https://github.com/hadley/ggplot2/blob/master/R/fortify.r