sjanssen2 / spike

NGS pipeline for SNV detection in tumor context
BSD 3-Clause "New" or "Revised" License
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Ss 487 #230

Open deyazoubi opened 4 years ago

deyazoubi commented 4 years ago

in order to compare healthy with tumor do the following leave spike_entity_role empty for example case1 see https://github.com/sjanssen2/spike/commit/c2585e3e60b1147474dff09404b330cceb42182d healthy MRJ_366 tumor MRJ_366 tumor2 -----

case2 https://github.com/sjanssen2/spike/commit/80d7db6b7eda0b5df4f11b7d1eca12b27fe459a0 healthy MRJ_366_C2 tumor MRJ_366_C2 tumor1 -----

each case have been process separately