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sjoerdk / idiscore

Deidentification of DICOM images using Attribute Confidentiality Profiles
GNU General Public License v3.0
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Scheduled weekly dependency update for week 47 #26

Closed pyup-bot closed 3 years ago

pyup-bot commented 3 years ago

Update sphinx from 3.1.2 to 3.3.1.

Changelog ### 3.3.1 ``` ============================== Dependencies ------------ Incompatible changes -------------------- Deprecated ---------- Features added -------------- Bugs fixed ---------- * 8372: autodoc: autoclass directive became slower than Sphinx-3.2 * 7727: autosummary: raise PycodeError when documenting python package without __init__.py * 8364: C, properly initialize attributes in empty symbols. Testing -------- ``` ### 3.3.0 ``` ===================================== Deprecated ---------- * ``sphinx.builders.latex.LaTeXBuilder.usepackages`` * ``sphinx.builders.latex.LaTeXBuilder.usepackages_afger_hyperref`` * ``sphinx.ext.autodoc.SingledispatchFunctionDocumenter`` * ``sphinx.ext.autodoc.SingledispatchMethodDocumenter`` Features added -------------- * 8100: html: Show a better error message for failures on copying html_static_files * 8141: C: added a ``maxdepth`` option to :rst:dir:`c:alias` to insert nested declarations. * 8081: LaTeX: Allow to add LaTeX package via ``app.add_latex_package()`` until just before writing .tex file * 7996: manpage: Add :confval:`man_make_section_directory` to make a section directory on build man page * 8289: epub: Allow to suppress "duplicated ToC entry found" warnings from epub builder using :confval:`suppress_warnings`. * 8298: sphinx-quickstart: Add :option:`sphinx-quickstart --no-sep` option * 8304: sphinx.testing: Register public markers in sphinx.testing.fixtures * 8051: napoleon: use the obj role for all See Also items * 8050: napoleon: Apply :confval:`napoleon_preprocess_types` to every field * C and C++, show line numbers for previous declarations when duplicates are detected. * 8183: Remove substitution_reference nodes from doctree only on LaTeX builds Bugs fixed ---------- * 8085: i18n: Add support for having single text domain * 6640: i18n: Failed to override system message translation * 8143: autodoc: AttributeError is raised when False value is passed to autodoc_default_options * 8103: autodoc: functools.cached_property is not considered as a property * 8190: autodoc: parsing error is raised if some extension replaces docstring by string not ending with blank lines * 8142: autodoc: Wrong constructor signature for the class derived from typing.Generic * 8157: autodoc: TypeError is raised when annotation has invalid __args__ * 7964: autodoc: Tuple in default value is wrongly rendered * 8200: autodoc: type aliases break type formatting of autoattribute * 7786: autodoc: can't detect overloaded methods defined in other file * 8294: autodoc: single-string __slots__ is not handled correctly * 7785: autodoc: autodoc_typehints='none' does not effect to overloaded functions * 8192: napoleon: description is disappeared when it contains inline literals * 8142: napoleon: Potential of regex denial of service in google style docs * 8169: LaTeX: pxjahyper loaded even when latex_engine is not platex * 8215: LaTeX: 'oneside' classoption causes build warning * 8175: intersphinx: Potential of regex denial of service by broken inventory * 8277: sphinx-build: missing and redundant spacing (and etc) for console output on building * 7973: imgconverter: Check availability of imagemagick many times * 8255: py domain: number in default argument value is changed from hexadecimal to decimal * 8316: html: Prevent arrow keys changing page when button elements are focused * 8343: html search: Fix unnecessary load of images when parsing the document * 8254: html theme: Line numbers misalign with code lines * 8093: The highlight warning has wrong location in some builders (LaTeX, singlehtml and so on) * 8215: Eliminate Fancyhdr build warnings for oneside documents * 8239: Failed to refer a token in productionlist if it is indented * 8268: linkcheck: Report HTTP errors when ``linkcheck_anchors`` is ``True`` * 8245: linkcheck: take source directory into account for local files * 8321: linkcheck: ``tel:`` schema hyperlinks are detected as errors * 8323: linkcheck: An exit status is incorrect when links having unsupported schema found * 8188: C, add missing items to internal object types dictionary, e.g., preventing intersphinx from resolving them. * C, fix anon objects in intersphinx. * 8270, C++, properly reject functions as duplicate declarations if a non-function declaration of the same name already exists. * C, fix references to function parameters. Link to the function instead of a non-existing anchor. * 6914: figure numbers are unexpectedly assigned to uncaptioned items * 8320: make "inline" line numbers un-selectable Testing -------- * 8257: Support parallel build in sphinx.testing ``` ### 3.2.1 ``` ===================================== Features added -------------- * 8095: napoleon: Add :confval:`napoleon_preprocess_types` to enable the type preprocessor for numpy style docstrings * 8114: C and C++, parse function attributes after parameters and qualifiers. Bugs fixed ---------- * 8074: napoleon: Crashes during processing C-ext module * 8088: napoleon: "Inline literal start-string without end-string" warning in Numpy style Parameters section * 8084: autodoc: KeyError is raised on documenting an attribute of the broken class * 8091: autodoc: AttributeError is raised on documenting an attribute on Python 3.5.2 * 8099: autodoc: NameError is raised when target code uses ``TYPE_CHECKING`` * C++, fix parsing of template template paramters, broken by the fix of 7944 ``` ### 3.2.0 ``` ===================================== Deprecated ---------- * ``sphinx.ext.autodoc.members_set_option()`` * ``sphinx.ext.autodoc.merge_special_members_option()`` * ``sphinx.writers.texinfo.TexinfoWriter.desc`` * C, parsing of pre-v3 style type directives and roles, along with the options :confval:`c_allow_pre_v3` and :confval:`c_warn_on_allowed_pre_v3`. Features added -------------- * 2076: autodoc: Allow overriding of exclude-members in skip-member function * 8034: autodoc: ``:private-member:`` can take an explicit list of member names to be documented * 2024: autosummary: Add :confval:`autosummary_filename_map` to avoid conflict of filenames between two object with different case * 8011: autosummary: Support instance attributes as a target of autosummary directive * 7849: html: Add :confval:`html_codeblock_linenos_style` to change the style of line numbers for code-blocks * 7853: C and C++, support parameterized GNU style attributes. * 7888: napoleon: Add aliases Warn and Raise. * 7690: napoleon: parse type strings and make them hyperlinks as possible. The conversion rule can be updated via :confval:`napoleon_type_aliases` * 8049: napoleon: Create a hyperlink for each the type of parameter when :confval:`napoleon_use_params` is False * C, added :rst:dir:`c:alias` directive for inserting copies of existing declarations. * 7745: html: inventory is broken if the docname contains a space * 7991: html search: Allow searching for numbers * 7902: html theme: Add a new option :confval:`globaltoc_maxdepth` to control the behavior of globaltoc in sidebar * 7840: i18n: Optimize the dependencies check on bootstrap * 7768: i18n: :confval:`figure_language_filename` supports ``docpath`` token * 5208: linkcheck: Support checks for local links * 5090: setuptools: Link verbosity to distutils' -v and -q option * 6698: doctest: Add ``:trim-doctest-flags:`` and ``:no-trim-doctest-flags:`` options to doctest, testcode and testoutput directives * 7052: add ``:noindexentry:`` to the Python, C, C++, and Javascript domains. Update the documentation to better reflect the relationship between this option and the ``:noindex:`` option. * 7899: C, add possibility of parsing of some pre-v3 style type directives and roles and try to convert them to equivalent v3 directives/roles. Set the new option :confval:`c_allow_pre_v3` to ``True`` to enable this. The warnings printed from this functionality can be suppressed by setting :confval:`c_warn_on_allowed_pre_v3`` to ``True``. The functionality is immediately deprecated. * 7999: C, add support for named variadic macro arguments. * 8071: Allow to suppress "self referenced toctrees" warning Bugs fixed ---------- * 7886: autodoc: TypeError is raised on mocking generic-typed classes * 7935: autodoc: function signature is not shown when the function has a parameter having ``inspect._empty`` as its default value * 7901: autodoc: type annotations for overloaded functions are not resolved * 904: autodoc: An instance attribute cause a crash of autofunction directive * 1362: autodoc: ``private-members`` option does not work for class attributes * 7983: autodoc: Generator type annotation is wrongly rendered in py36 * 8030: autodoc: An uninitialized annotated instance variable is not documented when ``:inherited-members:`` option given * 8032: autodoc: A type hint for the instance variable defined at parent class is not shown in the document of the derived class * 8041: autodoc: An annotated instance variable on super class is not documented when derived class has other annotated instance variables * 7839: autosummary: cannot handle umlauts in function names * 7865: autosummary: Failed to extract summary line when abbreviations found * 7866: autosummary: Failed to extract correct summary line when docstring contains a hyperlink target * 7469: autosummary: "Module attributes" header is not translatable * 7940: apidoc: An extra newline is generated at the end of the rst file if a module has submodules * 4258: napoleon: decorated special methods are not shown * 7799: napoleon: parameters are not escaped for combined params in numpydoc * 7780: napoleon: multiple paramaters declaration in numpydoc was wrongly recognized when napoleon_use_params=True * 7715: LaTeX: ``numfig_secnum_depth > 1`` leads to wrong figure links * 7846: html theme: XML-invalid files were generated * 7894: gettext: Wrong source info is shown when using rst_epilog * 7691: linkcheck: HEAD requests are not used for checking * 4888: i18n: Failed to add an explicit title to ``:ref:`` role on translation * 7928: py domain: failed to resolve a type annotation for the attribute * 8008: py domain: failed to parse a type annotation containing ellipsis * 7994: std domain: option directive does not generate old node_id compatible with 2.x or older * 7968: i18n: The content of ``math`` directive is interpreted as reST on translation * 7768: i18n: The ``root`` element for :confval:`figure_language_filename` is not a path that user specifies in the document * 7993: texinfo: TypeError is raised for nested object descriptions * 7993: texinfo: a warning not supporting desc_signature_line node is shown * 7869: :rst:role:`abbr` role without an explanation will show the explanation from the previous abbr role * 8048: graphviz: graphviz.css was copied on building non-HTML document * C and C++, removed ``noindex`` directive option as it did nothing. * 7619: Duplicated node IDs are generated if node has multiple IDs * 2050: Symbols sections are appeared twice in the index page * 8017: Fix circular import in sphinx.addnodes * 7986: CSS: make "highlight" selector more robust * 7944: C++, parse non-type template parameters starting with a dependent qualified name. * C, don't deepcopy the entire symbol table and make a mess every time an enumerator is handled. ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: http://sphinx-doc.org/

Update sphinx-autobuild from 0.7.1 to 2020.9.1.

Changelog ### 2020.09.01 ``` ----------------------- * Adopt Calendar Versioning. * Modernize codebase and require Python 3.6+. * Directly depend on ``sphinx``. * Rewritten documentation. * Invoke sphinx via ``{sys.executable} -m sphinx`` instead of ``sphinx-build``. * Trim dependencies down to only ``livereload`` and ``sphinx``. * Drop custom adapter for ``watchdog``. * Drop ``--poll`` flag. * Drop single letter variants for flags that were specific to sphinx-autobuild. ```
Links - PyPI: https://pypi.org/project/sphinx-autobuild - Changelog: https://pyup.io/changelogs/sphinx-autobuild/ - Repo: https://github.com/GaretJax/sphinx_autobuild

Update sphinx_autodoc_typehints from 1.11.0 to 1.11.1.

Changelog ### 1.11.1 ``` ====== * Changed formatting of ``None`` to point to the Python stdlib docs (PR by Dominic Davis-Foster) * Updated special dataclass handling (PR by Lihu Ben-Ezri-Ravin) ```
Links - PyPI: https://pypi.org/project/sphinx-autodoc-typehints - Changelog: https://pyup.io/changelogs/sphinx-autodoc-typehints/

Update black from 19.10b0 to 20.8b1.

Changelog ### 20.8b1 ``` _Packaging_ - explicitly depend on Click 7.1.2 or newer as `Black` no longer works with versions older than 7.0 ``` ### 20.8b0 ``` _Black_ - re-implemented support for explicit trailing commas: now it works consistently within any bracket pair, including nested structures (1288 and duplicates) - `Black` now reindents docstrings when reindenting code around it (1053) - `Black` now shows colored diffs (1266) - `Black` is now packaged using 'py3' tagged wheels (1388) - `Black` now supports Python 3.8 code, e.g. star expressions in return statements (1121) - `Black` no longer normalizes capital R-string prefixes as those have a community-accepted meaning (1244) - `Black` now uses exit code 2 when specified configuration file doesn't exit (1361) - `Black` now works on AWS Lambda (1141) - added `--force-exclude` argument (1032) - removed deprecated `--py36` option (1236) - fixed `--diff` output when EOF is encountered (526) - fixed ` fmt: off` handling around decorators (560) - fixed unstable formatting with some ` type: ignore` comments (1113) - fixed invalid removal on organizing brackets followed by indexing (1575) - introduced `black-primer`, a CI tool that allows us to run regression tests against existing open source users of Black (1402) - introduced property-based fuzzing to our test suite based on Hypothesis and Hypothersmith (1566) - implemented experimental and disabled by default long string rewrapping (1132), hidden under a `--experimental-string-processing` flag while it's being worked on; this is an undocumented and unsupported feature, you lose Internet points for depending on it (1609) Vim plugin - prefer virtualenv packages over global packages (1383) ```
Links - PyPI: https://pypi.org/project/black - Changelog: https://pyup.io/changelogs/black/ - Repo: https://github.com/psf/black

Update bump2version from 1.0.0 to 1.0.1.

Changelog ### 1.0.1 ``` - Added: enable special characters in search/replace, thanks mckelvin - Added: allow globbing a pattern to match multiple files, thanks balrok - Added: way to only bump a specified file via --no-configured-files, thanks balrok - Fixed: dry-run now correctly outputs, thanks fmigneault - Housekeeping: documentation for lightweight tags improved, thanks GreatBahram - Housekeeping: added related tools document, thanks florisla - Fixed: no more falling back to default search, thanks florisla ```
Links - PyPI: https://pypi.org/project/bump2version - Changelog: https://pyup.io/changelogs/bump2version/ - Repo: https://github.com/c4urself/bump2version

Update pytest from 5.4.3 to 6.1.2.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/pytest - Homepage: https://docs.pytest.org/en/latest/

Update pydicom from 2.0.0 to 2.1.1.

Changelog ### 2.1.1 ``` A couple of minor bug fixes. See the [release notes](https://pydicom.github.io/pydicom/stable/release_notes/index.html) for details. ``` ### 2.1.0 ``` * Dropped support for Python 3.5 (only Python 3.6+ supported) * Added keyword property for the new UID keywords in version 2020d of the DICOM Standard * Added testing of the variable names used when setting Dataset attributes and INVALID_KEYWORD_BEHAVIOR config option to allow customizing the behavior when a camel case variable name is used that isn’t a known element keyword (1014) * Added INVALID_KEY_BEHAVIOR config option to allow customizing the behavior when an invalid key is used with the Dataset in operator (1200) * Implemented full support (loading, accessing, modifying, writing) of DICOM File-sets and their DICOMDIR files via the FileSet class (9, 243, 1093) * Data dictionaries updated to version 2020d of the DICOM Standard Added option to turn on pydicom future breaking behavior to allow user code to check itself against the next major version release. Set environment variable “PYDICOM_FUTURE” to “True” or call future_behavior() See the [release notes](https://pydicom.github.io/pydicom/stable/release_notes/index.html) for full details ```
Links - PyPI: https://pypi.org/project/pydicom - Changelog: https://pyup.io/changelogs/pydicom/ - Repo: https://github.com/pydicom/pydicom/archive/master.zip

Update factory-boy from 2.12 to 3.1.0.

Changelog ### 3.1.0 ``` ------------------ *New:* - Allow all types of declarations in :class:`factory.Faker` calls - enables references to other faker-defined attributes. ``` ### 3.0.1 ``` ------------------ *Bugfix:* - :issue:`769`: Fix ``import factory; factory.django.DjangoModelFactory`` and similar calls. ``` ### 3.0.0 ``` ------------------ Breaking changes """""""""""""""" The following aliases were removed: +------------------------------------------------+---------------------------------------------------+ | Broken alias | New import | +================================================+===================================================+ | ``from factory import DjangoModelFactory`` | ``from factory.django import DjangoModelFactory`` | +------------------------------------------------+---------------------------------------------------+ | ``from factory import MogoFactory`` | ``from factory.mogo import MogoFactory`` | +------------------------------------------------+---------------------------------------------------+ | ``from factory.fuzzy import get_random_state`` | ``from factory.random import get_random_state`` | +------------------------------------------------+---------------------------------------------------+ | ``from factory.fuzzy import set_random_state`` | ``from factory.random import set_random_state`` | +------------------------------------------------+---------------------------------------------------+ | ``from factory.fuzzy import reseed_random`` | ``from factory.random import reseed_random`` | +------------------------------------------------+---------------------------------------------------+ *Removed:* - Drop support for Python 2 and 3.4. These versions `are not maintained anymore <https://devguide.python.org/devcycle/end-of-life-branches>`__. - Drop support for Django 2.0 and 2.1. These versions `are not maintained anymore <https://www.djangoproject.com/download/supported-versions>`__. - Remove deprecated ``force_flush`` from ``SQLAlchemyModelFactory`` options. Use ``sqlalchemy_session_persistence = "flush"`` instead. - Drop deprecated ``attributes()`` from :class:`~factory.Factory` subclasses; use ``factory.make_factory(dict, FactoryClass._meta.pre_declarations)`` instead. - Drop deprecated ``declarations()`` from :class:`~factory.Factory` subclasses; use ``FactoryClass._meta.pre_declarations`` instead. - Drop ``factory.compat`` module. *New:* - Add support for Python 3.8 - Add support for Django 2.2 and 3.0 - Report misconfiguration when a :py:class:`~factory.Factory` is used as the :py:attr:`~factory.Factory.model` for another :py:class:`~factory.Factory`. - Allow configuring the color palette of :py:class:`~factory.django.ImageField`. - :py:meth:`get_random_state()` now represents the state of Faker and ``factory_boy`` fuzzy attributes. - Add SQLAlchemy ``get_or_create`` support *Improvements:* - :issue:`561`: Display a developer-friendly error message when providing a model instead of a factory in a :class:`~factory.declarations.SubFactory` class. *Bugfix:* - Fix issue with SubFactory not preserving signal muting behaviour of the used factory, thanks `Patrick Stein <https://github.com/PFStein>`_. - Fix issue with overriding params in a Trait, thanks `Grégoire Rocher <https://github.com/cecedille1>`_. - :issue:`598`: Limit ``get_or_create`` behavior to fields specified in ``django_get_or_create``. - :issue:`606`: Re-raise :class:`~django.db.IntegrityError` when ``django_get_or_create`` with multiple fields fails to lookup model using user provided keyword arguments. - :issue:`630`: TypeError masked by __repr__ AttributeError when initializing ``Maybe`` with inconsistent phases. ```
Links - PyPI: https://pypi.org/project/factory-boy - Changelog: https://pyup.io/changelogs/factory-boy/ - Repo: https://github.com/FactoryBoy/factory_boy

Update coverage from 5.2 to 5.3.

Changelog ### 5.3 ``` -------------------------- - The ``source`` setting has always been interpreted as either a file path or a module, depending on which existed. If both interpretations were valid, it was assumed to be a file path. The new ``source_pkgs`` setting can be used to name a package to disambiguate this case. Thanks, Thomas Grainger. Fixes `issue 268`_. - If a plugin was disabled due to an exception, we used to still try to record its information, causing an exception, as reported in `issue 1011`_. This is now fixed. .. _issue 268: https://github.com/nedbat/coveragepy/issues/268 .. _issue 1011: https://github.com/nedbat/coveragepy/issues/1011 .. _changes_521: ``` ### 5.2.1 ``` ---------------------------- - The dark mode HTML report still used light colors for the context listing, making them unreadable (`issue 1009`_). This is now fixed. - The time stamp on the HTML report now includes the time zone. Thanks, Xie Yanbo (`pull request 960`_). .. _pull request 960: https://github.com/nedbat/coveragepy/pull/960 .. _issue 1009: https://github.com/nedbat/coveragepy/issues/1009 .. _changes_52: ```
Links - PyPI: https://pypi.org/project/coverage - Changelog: https://pyup.io/changelogs/coverage/ - Repo: https://github.com/nedbat/coveragepy

Update flake8 from 3.8.3 to 3.8.4.

Changelog ### 3.8.4 ``` ------------------- You can view the `3.8.4 milestone`_ on GitLab for more details. Bugs Fixed ~~~~~~~~~~ - Fix multiprocessing errors on platforms without ``sem_open`` syscall. (See also `GitLab!448`_) - Fix skipping of physical checks on the last line of a file which does not end in a newline (See also `GitLab!451`_) .. all links .. _3.8.4 milestone: https://gitlab.com/pycqa/flake8/-/milestones/37 .. merge request links .. _GitLab!448: https://gitlab.com/pycqa/flake8/merge_requests/448 .. _GitLab!451: https://gitlab.com/pycqa/flake8/merge_requests/451 ```
Links - PyPI: https://pypi.org/project/flake8 - Changelog: https://pyup.io/changelogs/flake8/ - Repo: https://gitlab.com/pycqa/flake8

Update pip from 20.1.1 to 20.2.4.

Changelog ### 20.2.4 ``` =================== Deprecations and Removals ------------------------- - Document that certain removals can be fast tracked. (`8417 <https://github.com/pypa/pip/issues/8417>`_) - Document that Python versions are generally supported until PyPI usage falls below 5%. (`8927 <https://github.com/pypa/pip/issues/8927>`_) Features -------- - New resolver: Avoid accessing indexes when the installed candidate is preferred and considered good enough. (`8023 <https://github.com/pypa/pip/issues/8023>`_) - Improve error message friendliness when an environment has packages with corrupted metadata. (`8676 <https://github.com/pypa/pip/issues/8676>`_) - Cache package listings on index packages so they are guarenteed to stay stable during a pip command session. This also improves performance when a index page is accessed multiple times during the command session. (`8905 <https://github.com/pypa/pip/issues/8905>`_) - New resolver: Tweak resolution logic to improve user experience when user-supplied requirements conflict. (`8924 <https://github.com/pypa/pip/issues/8924>`_) Bug Fixes --------- - New resolver: Correctly respect ``Requires-Python`` metadata to reject incompatible packages in ``--no-deps`` mode. (`8758 <https://github.com/pypa/pip/issues/8758>`_) - New resolver: Pick up hash declarations in constraints files and use them to filter available distributions. (`8792 <https://github.com/pypa/pip/issues/8792>`_) - New resolver: If a package appears multiple times in user specification with different ``--hash`` options, only hashes that present in all specifications should be allowed. (`8839 <https://github.com/pypa/pip/issues/8839>`_) Improved Documentation ---------------------- - Add ux documentation (`8807 <https://github.com/pypa/pip/issues/8807>`_) ``` ### 20.2.3 ``` =================== Deprecations and Removals ------------------------- - Deprecate support for Python 3.5 (`8181 <https://github.com/pypa/pip/issues/8181>`_) Features -------- - Make the ``setup.py install`` deprecation warning less noisy. We warn only when ``setup.py install`` succeeded and ``setup.py bdist_wheel`` failed, as situations where both fails are most probably irrelevant to this deprecation. (`8752 <https://github.com/pypa/pip/issues/8752>`_) ``` ### 20.2.2 ``` =================== Bug Fixes --------- - Only attempt to use the keyring once and if it fails, don't try again. This prevents spamming users with several keyring unlock prompts when they cannot unlock or don't want to do so. (`8090 <https://github.com/pypa/pip/issues/8090>`_) - Fix regression that distributions in system site-packages are not correctly found when a virtual environment is configured with ``system-site-packages`` on. (`8695 <https://github.com/pypa/pip/issues/8695>`_) - Disable caching for range requests, which causes corrupted wheels when pip tries to obtain metadata using the feature ``fast-deps``. (`8701 <https://github.com/pypa/pip/issues/8701>`_, `8716 <https://github.com/pypa/pip/issues/8716>`_) - Always use UTF-8 to read ``pyvenv.cfg`` to match the built-in ``venv``. (`8717 <https://github.com/pypa/pip/issues/8717>`_) - 2020 Resolver: Correctly handle marker evaluation in constraints and exclude them if their markers do not match the current environment. (`8724 <https://github.com/pypa/pip/issues/8724>`_) ``` ### 20.2.1 ``` =================== Features -------- - Ignore require-virtualenv in ``pip list`` (`8603 <https://github.com/pypa/pip/issues/8603>`_) Bug Fixes --------- - Correctly find already-installed distributions with dot (``.``) in the name and uninstall them when needed. (`8645 <https://github.com/pypa/pip/issues/8645>`_) - Trace a better error message on installation failure due to invalid ``.data`` files in wheels. (`8654 <https://github.com/pypa/pip/issues/8654>`_) - Fix SVN version detection for alternative SVN distributions. (`8665 <https://github.com/pypa/pip/issues/8665>`_) - New resolver: Correctly include the base package when specified with extras in ``--no-deps`` mode. (`8677 <https://github.com/pypa/pip/issues/8677>`_) - Use UTF-8 to handle ZIP archive entries on Python 2 according to PEP 427, so non-ASCII paths can be resolved as expected. (`8684 <https://github.com/pypa/pip/issues/8684>`_) Improved Documentation ---------------------- - Add details on old resolver deprecation and removal to migration documentation. (`8371 <https://github.com/pypa/pip/issues/8371>`_) - Fix feature flag name in docs. (`8660 <https://github.com/pypa/pip/issues/8660>`_) ``` ### 20.2 ``` ================= Deprecations and Removals ------------------------- - Deprecate setup.py-based builds that do not generate an ``.egg-info`` directory. (`6998 <https://github.com/pypa/pip/issues/6998>`_, `8617 <https://github.com/pypa/pip/issues/8617>`_) - Disallow passing install-location-related arguments in ``--install-options``. (`7309 <https://github.com/pypa/pip/issues/7309>`_) - Add deprecation warning for invalid requirements format "base>=1.0[extra]" (`8288 <https://github.com/pypa/pip/issues/8288>`_) - Deprecate legacy setup.py install when building a wheel failed for source distributions without pyproject.toml (`8368 <https://github.com/pypa/pip/issues/8368>`_) - Deprecate -b/--build/--build-dir/--build-directory. Its current behaviour is confusing and breaks in case different versions of the same distribution need to be built during the resolution process. Using the TMPDIR/TEMP/TMP environment variable, possibly combined with --no-clean covers known use cases. (`8372 <https://github.com/pypa/pip/issues/8372>`_) - Remove undocumented and deprecated option ``--always-unzip`` (`8408 <https://github.com/pypa/pip/issues/8408>`_) Features -------- - Log debugging information about pip, in ``pip install --verbose``. (`3166 <https://github.com/pypa/pip/issues/3166>`_) - Refine error messages to avoid showing Python tracebacks when an HTTP error occurs. (`5380 <https://github.com/pypa/pip/issues/5380>`_) - Install wheel files directly instead of extracting them to a temp directory. (`6030 <https://github.com/pypa/pip/issues/6030>`_) - Add a beta version of pip's next-generation dependency resolver. Move pip's new resolver into beta, remove the ``--unstable-feature=resolver`` flag, and enable the ``--use-feature=2020-resolver`` flag. The new resolver is significantly stricter and more consistent when it receives incompatible instructions, and reduces support for certain kinds of :ref:`Constraints Files`, so some workarounds and workflows may break. More details about how to test and migrate, and how to report issues, at :ref:`Resolver changes 2020` . Maintainers are preparing to ``` ### 20.2b1 ``` =================== Bug Fixes --------- - Correctly treat wheels containing non-ASCII file contents so they can be installed on Windows. (`5712 <https://github.com/pypa/pip/issues/5712>`_) - Prompt the user for password if the keyring backend doesn't return one (`7998 <https://github.com/pypa/pip/issues/7998>`_) Improved Documentation ---------------------- - Add GitHub issue template for reporting when the dependency resolver fails (`8207 <https://github.com/pypa/pip/issues/8207>`_) ```
Links - PyPI: https://pypi.org/project/pip - Changelog: https://pyup.io/changelogs/pip/ - Homepage: https://pip.pypa.io/

Update tox from 3.16.1 to 3.20.1.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/tox - Docs: http://tox.readthedocs.org

Update watchdog from 0.10.3 to 0.10.4.

Changelog ### 0.10.4 ``` ~~~~~~ 2020-11-21 • `full history <https://github.com/gorakhargosh/watchdog/compare/v0.10.3...v0.10.4>`__ - Add ``logger`` parameter for the ``LoggingEventHandler`` (`676 <https://github.com/gorakhargosh/watchdog/pull/676>`_) - Replace mutable default arguments with ``if None`` implementation (`677 <https://github.com/gorakhargosh/watchdog/pull/677>`_) - Expand tests to Python 2.7 and 3.5-3.10 for GNU/Linux, macOS and Windows - [mac] Performance improvements for the ``fsevents`` module (`680 <https://github.com/gorakhargosh/watchdog/pull/680>`_) - [mac] Prevent compilation of ``watchdog_fsevents.c`` on non-macOS machines (`687 <https://github.com/gorakhargosh/watchdog/pull/687>`_) - [watchmedo] Handle shutdown events from ``SIGTERM`` and ``SIGINT`` more reliably (`693 <https://github.com/gorakhargosh/watchdog/pull/693>`_) - Thanks to our beloved contributors: Sraw, CCP-Aporia, BoboTiG, maybe-sybr ```
Links - PyPI: https://pypi.org/project/watchdog - Changelog: https://pyup.io/changelogs/watchdog/ - Repo: http://github.com/gorakhargosh/watchdog - Docs: https://pythonhosted.org/watchdog/

Update pre-commit from 2.6.0 to 2.9.0.

Changelog ### 2.9.0 ``` ================== Features - Add `types_or` which allows matching multiple disparate `types` in a hook - 1677 by MarcoGorelli. - 607 by asottile. - Add Github Sponsors / Open Collective links - https://github.com/sponsors/asottile - https://opencollective.com/pre-commit Fixes - Improve cleanup for `language: dotnet` - 1678 by rkm. - Fix "xargs" when running windows batch files - 1686 PR by asottile. - 1604 issue by apietrzak. - 1604 issue by ufwtlsb. - Fix conflict with external `rbenv` and `language_version: default` - 1700 PR by asottile. - 1699 issue by abuxton. - Improve performance of `git status` / `git diff` commands by ignoring submodules - 1704 PR by Vynce. - 1701 issue by Vynce. ``` ### 2.8.2 ``` ================== Fixes - Fix installation of ruby hooks with `language_version: default` - 1671 issue by aerickson. - 1672 PR by asottile. ``` ### 2.8.1 ``` ================== Fixes - Allow default `language_version` of `system` when the homedir is `/` - 1669 PR by asottile. ``` ### 2.8.0 ``` ================== Features - Update `rbenv` / `ruby-build` - 1612 issue by tdeo. - 1614 PR by asottile. - Update `sample-config` versions - 1611 PR by mcsitter. - Add new language: `dotnet` - 1598 by rkm. - Add `--negate` option to `language: pygrep` hooks - 1643 PR by MarcoGorelli. - Add zipapp support - 1616 PR by asottile. - Run pre-commit through https://pre-commit.ci - 1662 PR by asottile. - Add new language: `coursier` (a jvm-based package manager) - 1633 PR by JosephMoniz. - Exit with distinct codes: 1 (user error), 3 (unexpected error), 130 (^C) - 1601 PR by int3l. Fixes - Improve `healthy()` check for `language: node` + `language_version: system` hooks when the system executable goes missing. - pre-commit/action45 issue by KOliver94. - 1589 issue by asottile. - 1590 PR by asottile. - Fix excess whitespace in error log traceback - 1592 PR by asottile. - Fix posixlike shebang invocations with shim executables of the git hook script on windows. - 1593 issue by Celeborn2BeAlive. - 1595 PR by Celeborn2BeAlive. - Remove hard-coded `C:\PythonXX\python.exe` path on windows as it caused confusion (and `virtualenv` can sometimes do better) - 1599 PR by asottile. - Fix `language: ruby` hooks when `--format-executable` is present in a gemrc - issue by `Rainbow Tux` (discord). - 1603 PR by asottile. - Move `cygwin` / `win32` mismatch error earlier to catch msys2 mismatches - 1605 issue by danyeaw. - 1606 PR by asottile. - Remove `-p` workaround for old `virtualenv` - 1617 PR by asottile. - Fix `language: node` installations to not symlink outside of the environment - pre-commit-ci/issues2 issue by DanielJSottile. - 1667 PR by asottile. - Don't identify shim executables as valid `system` for defaulting `language_version` for `language: node` / `language: ruby` - 1658 issue by adithyabsk. - 1668 PR by asottile. ``` ### 2.7.1 ``` ================== Fixes - Improve performance of docker hooks by removing slow `ps` call - 1572 PR by rkm. - 1569 issue by asottile. - Fix un-`healthy()` invalidation followed by install being reported as un-`healthy()`. - 1576 PR by asottile. - 1575 issue by jab. - Fix rare file race condition on windows with `os.replace()` - 1577 PR by asottile. ``` ### 2.7.0 ``` ================== Features - Produce error message if an environment is immediately unhealthy - 1535 PR by asottile. - Add --no-allow-missing-config option to init-templatedir - 1539 PR by singergr. - Add warning for old list-style configuration - 1544 PR by asottile. - Allow pre-commit to succeed on a readonly store. - 1570 PR by asottile. - 1536 issue by asottile. Fixes - Fix error messaging when the store directory is readonly - 1546 PR by asottile. - 1536 issue by asottile. - Improve `diff` performance with many hooks - 1566 PR by jhenkens. - 1564 issue by jhenkens. ```
Links - PyPI: https://pypi.org/project/pre-commit - Changelog: https://pyup.io/changelogs/pre-commit/ - Repo: https://github.com/pre-commit/pre-commit

Update beautifulsoup4 from 4.9.1 to 4.9.3.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/beautifulsoup4 - Homepage: http://www.crummy.com/software/BeautifulSoup/bs4/

Update requests from 2.24.0 to 2.25.0.

Changelog ### 2.25.0 ``` ------------------ **Improvements** - Added support for NETRC environment variable. (5643) **Dependencies** - Requests now supports urllib3 v1.26. **Deprecations** - Requests v2.25.x will be the last release series with support for Python 3.5. - The `requests[security]` extra is officially deprecated and will be removed in Requests v2.26.0. ```
Links - PyPI: https://pypi.org/project/requests - Changelog: https://pyup.io/changelogs/requests/ - Docs: https://requests.readthedocs.io
pyup-bot commented 3 years ago

Closing this in favor of #27