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sjoerdk / idiscore

Deidentification of DICOM images using Attribute Confidentiality Profiles
GNU General Public License v3.0
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Scheduled weekly dependency update for week 28 #6

Closed pyup-bot closed 4 years ago

pyup-bot commented 4 years ago

Update sphinx from 3.1.1 to 3.1.2.

Changelog ### 3.1.2 ``` ===================================== Incompatible changes -------------------- * 7650: autodoc: the signature of base function will be shown for decorated functions, not a signature of decorator Bugs fixed ---------- * 7844: autodoc: Failed to detect module when relative module name given * 7856: autodoc: AttributeError is raised when non-class object is given to the autoclass directive * 7850: autodoc: KeyError is raised for invalid mark up when autodoc_typehints is 'description' * 7812: autodoc: crashed if the target name matches to both an attribute and module that are same name * 7650: autodoc: function signature becomes ``(*args, **kwargs)`` if the function is decorated by generic decorator * 7812: autosummary: generates broken stub files if the target code contains an attribute and module that are same name * 7806: viewcode: Failed to resolve viewcode references on 3rd party builders * 7838: html theme: List items have extra vertical space * 7878: html theme: Undesired interaction between "overflow" and "float" ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: http://sphinx-doc.org/

Update sphinx_autodoc_typehints from 1.10.3 to 1.11.0.

Changelog ### 1.11.0 ``` ====== * Dropped support for Sphinx < 3.0 * Added support for alternative parameter names (``arg``, ``argument``, ``parameter``) * Fixed import path for Signature (PR by Matthew Treinish) * Fixed ``TypeError`` when formatting a parametrized ``typing.IO`` annotation * Fixed data class displaying a return type in its ``__init__()`` method ```
Links - PyPI: https://pypi.org/project/sphinx-autodoc-typehints - Changelog: https://pyup.io/changelogs/sphinx-autodoc-typehints/

Update dicomgenerator from **0.3.* to 0.3.7**.

Changelog ### 0.1.0 ``` ------------------ * First release on PyPI. ```
Links - PyPI: https://pypi.org/project/dicomgenerator - Changelog: https://pyup.io/changelogs/dicomgenerator/ - Repo: https://github.com/sjoerdk/dicomgenerator

Update coverage from 5.1 to 5.2.

Changelog ### 5.2 ``` -------------------------- - The HTML report has been redesigned by Victor Salvino. There is now a dark mode, the code text is larger, and system sans serif fonts are used, in addition to other small changes (`issue 858`_ and `pull request 931`_). - The ``coverage report`` and ``coverage html`` commands now accept a ``--precision`` option to control the number of decimal points displayed. Thanks, Teake Nutma (`pull request 982`_). - The ``coverage report`` and ``coverage html`` commands now accept a ``--no-skip-covered`` option to negate ``--skip-covered``. Thanks, Anthony Sottile (`issue 779`_ and `pull request 932`_). - The ``--skip-empty`` option is now available for the XML report, closing `issue 976`_. - The ``coverage report`` command now accepts a ``--sort`` option to specify how to sort the results. Thanks, Jerin Peter George (`pull request 1005`_). - If coverage fails due to the coverage total not reaching the ``--fail-under`` value, it will now print a message making the condition clear. Thanks, Naveen Yadav (`pull request 977`_). - TOML configuration files with non-ASCII characters would cause errors on Windows (`issue 990`_). This is now fixed. - The output of ``--debug=trace`` now includes information about how the ``--source`` option is being interpreted, and the module names being considered. .. _pull request 931: https://github.com/nedbat/coveragepy/pull/931 .. _pull request 932: https://github.com/nedbat/coveragepy/pull/932 .. _pull request 977: https://github.com/nedbat/coveragepy/pull/977 .. _pull request 982: https://github.com/nedbat/coveragepy/pull/982 .. _pull request 1005: https://github.com/nedbat/coveragepy/pull/1005 .. _issue 779: https://github.com/nedbat/coveragepy/issues/779 .. _issue 858: https://github.com/nedbat/coveragepy/issues/858 .. _issue 976: https://github.com/nedbat/coveragepy/issues/976 .. _issue 990: https://github.com/nedbat/coveragepy/issues/990 .. _changes_51: ```
Links - PyPI: https://pypi.org/project/coverage - Changelog: https://pyup.io/changelogs/coverage/ - Repo: https://github.com/nedbat/coveragepy

Update tox from 3.15.2 to 3.16.1.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/tox - Docs: http://tox.readthedocs.org

Update twine from 3.1.1 to 3.2.0.

Changelog ### 3.2.0 ``` * :feature:`666` Improve display of HTTP errors during upload * :feature:`649` Use red text when printing errors on the command line * :feature:`652` Print packages and signatures to be uploaded when using ``--verbose`` option * :bug:`655 major` Update URL to ``.pypirc`` specfication * :feature:`602` Require repository URL scheme to be ``http`` or ``https`` * :bug:`612 major` Don't raise an exception when Python version can't be parsed from filename * :bug:`611 major` Fix inaccurate retry message during ``upload`` * :bug:`601 major` Clarify error messages for archive format * :feature:`231` Add type annotations, checked with mypy, with :pep:`561` support for users of Twine's API ```
Links - PyPI: https://pypi.org/project/twine - Changelog: https://pyup.io/changelogs/twine/ - Docs: https://twine.readthedocs.io/

Update watchdog from 0.10.2 to 0.10.3.

Changelog ### 0.10.3 ``` ~~~~~~ 2020-06-25 • `full history <https://github.com/gorakhargosh/watchdog/compare/v0.10.2...v0.10.3>`__ - Ensure ``ObservedWatch.path`` is a string (`651 <https://github.com/gorakhargosh/watchdog/pull/651>`_) - [inotify] Allow to monitor single file (`655 <https://github.com/gorakhargosh/watchdog/pull/655>`__) - [inotify] Prevent raising an exception when a file in a monitored folder has no permissions (`669 <https://github.com/gorakhargosh/watchdog/pull/669>`__, `670 <https://github.com/gorakhargosh/watchdog/pull/670>`__) - Thanks to our beloved contributors: brant-ruan, rec, andfoy, BoboTiG ```
Links - PyPI: https://pypi.org/project/watchdog - Changelog: https://pyup.io/changelogs/watchdog/ - Repo: http://github.com/gorakhargosh/watchdog - Docs: https://pythonhosted.org/watchdog/

Update pre-commit from 2.5.1 to 2.6.0.

Changelog ### 2.6.0 ``` ================== Fixes - Fix node hooks when `NPM_CONFIG_USERCONFIG` is set - 1521 PR by asottile. - 1516 issue by rkm. Features - Skip `rbenv` / `ruby-download` if system ruby is available - 1509 PR by asottile. - Partial support for ruby on windows (if system ruby is installed) - 1509 PR by asottile. - 201 issue by asottile. ```
Links - PyPI: https://pypi.org/project/pre-commit - Changelog: https://pyup.io/changelogs/pre-commit/ - Repo: https://github.com/pre-commit/pre-commit

Update requests from 2.23.0 to 2.24.0.

Changelog ### 2.24.0 ``` ------------------- **Improvements** - pyOpenSSL TLS implementation is now only used if Python either doesn't have an `ssl` module or doesn't support SNI. Previously pyOpenSSL was unconditionally used if available. This applies even if pyOpenSSL is installed via the `requests[security]` extra (5443) - Redirect resolution should now only occur when `allow_redirects` is True. (5492) - No longer perform unnecessary Content-Length calculation for requests that won't use it. (5496) ```
Links - PyPI: https://pypi.org/project/requests - Changelog: https://pyup.io/changelogs/requests/ - Docs: https://requests.readthedocs.io
codecov-commenter commented 4 years ago

Codecov Report

Merging #6 into master will not change coverage. The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff           @@
##           master       #6   +/-   ##
=======================================
  Coverage   72.40%   72.40%           
=======================================
  Files          22       22           
  Lines         750      750           
=======================================
  Hits          543      543           
  Misses        207      207

Continue to review full report at Codecov.

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