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sjoerdk / idiscore

Deidentification of DICOM images using Attribute Confidentiality Profiles
GNU General Public License v3.0
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Scheduled weekly dependency update for week 37 #64

Closed pyup-bot closed 3 years ago

pyup-bot commented 3 years ago

Update sphinx from 3.5.4 to 4.2.0.

Changelog ### 4.2.0 ``` ===================================== Features added -------------- * 9445: autodoc: Support class properties * 9479: autodoc: Emit a warning if target is a mocked object * 9560: autodoc: Allow to refer NewType instances with module name in Python 3.10 or above * 9447: html theme: Expose the version of Sphinx in the form of tuple as a template variable ``sphinx_version_tuple`` * 9594: manpage: Suppress the title of man page if description is empty * 9445: py domain: ``:py:property:`` directive supports ``:classmethod:`` option to describe the class property * 9524: test: SphinxTestApp can take ``builddir`` as an argument * 9535: C and C++, support more fundamental types, including GNU extensions. Bugs fixed ---------- * 9608: apidoc: apidoc does not generate a module definition for implicit namespace package * 9504: autodoc: generate incorrect reference to the parent class if the target class inherites the class having ``_name`` attribute * 9537, 9589: autodoc: Some objects under ``typing`` module are not displayed well with the HEAD of 3.10 * 9487: autodoc: typehint for cached_property is not shown * 9509: autodoc: AttributeError is raised on failed resolving typehints * 9518: autodoc: autodoc_docstring_signature does not effect to ``__init__()`` and ``__new__()`` * 9522: autodoc: PEP 585 style typehints having arguments (ex. ``list[int]``) are not displayed well * 9481: autosummary: some warnings contain non-existing filenames * 9568: autosummary: summarise overlined sectioned headings correctly * 9600: autosummary: Type annotations which contain commas in autosummary table are not removed completely * 9481: c domain: some warnings contain non-existing filenames * 9481: cpp domain: some warnings contain non-existing filenames * 9456: html search: abbreation marks are inserted to the search result if failed to fetch the content of the page * 9617: html search: The JS requirement warning is shown if browser is slow * 9267: html theme: CSS and JS files added by theme were loaded twice * 9585: py domain: ``:type:`` option for :rst:dir:`py:property` directive does not create a hyperlink * 9576: py domain: Literal typehint was converted to a cross reference * 9535 comment: C++, fix parsing of defaulted function parameters that are function pointers. * 9564: smartquotes: don't adjust typography for text with language-highlighted ``:code:`` role. * 9512: sphinx-build: crashed with the HEAD of Python 3.10 ``` ### 4.1.2 ``` ===================================== Incompatible changes -------------------- * 9435: linkcheck: Disable checking automatically generated anchors on github.com (ex. anchors in reST/Markdown documents) Bugs fixed ---------- * 9489: autodoc: Custom types using ``typing.NewType`` are not displayed well with the HEAD of 3.10 * 9490: autodoc: Some objects under ``typing`` module are not displayed well with the HEAD of 3.10 * 9436, 9471: autodoc: crashed if ``autodoc_class_signature = "separated"`` * 9456: html search: html_copy_source can't control the search summaries * 9435: linkcheck: Failed to check anchors in github.com ``` ### 4.1.1 ``` ===================================== Dependencies ------------ * 9434: sphinxcontrib-htmlhelp-2.0.0 or above * 9434: sphinxcontrib-serializinghtml-1.1.5 or above Bugs fixed ---------- * 9438: html: HTML logo or Favicon specified as file not being found on output ``` ### 4.1.0 ``` ===================================== Dependencies ------------ * Support jinja2-3.0 Deprecated ---------- * The ``app`` argument of ``sphinx.environment.BuildEnvironment`` becomes required * ``sphinx.application.Sphinx.html_theme`` * ``sphinx.ext.autosummary._app`` * ``sphinx.util.docstrings.extract_metadata()`` Features added -------------- * 8107: autodoc: Add ``class-doc-from`` option to :rst:dir:`autoclass` directive to control the content of the specific class like :confval:`autoclass_content` * 8588: autodoc: :confval:`autodoc_type_aliases` now supports dotted name. It allows you to define an alias for a class with module name like ``foo.bar.BazClass`` * 9175: autodoc: Special member is not documented in the module * 9195: autodoc: The arguments of ``typing.Literal`` are wrongly rendered * 9185: autodoc: :confval:`autodoc_typehints` allows ``'both'`` setting to allow typehints to be included both in the signature and description * 4257: autodoc: Add :confval:`autodoc_class_signature` to separate the class entry and the definition of ``__init__()`` method * 8061, 9218: autodoc: Support variable comment for alias classes * 3014: autodoc: Add :event:`autodoc-process-bases` to modify the base classes of the class definitions * 9272: autodoc: Render enum values for the default argument value better * 9384: autodoc: ``autodoc_typehints='none'`` now erases typehints for variables, attributes and properties * 3257: autosummary: Support instance attributes for classes * 9358: html: Add "heading" role to the toctree items * 9225: html: Add span tag to the return typehint of method/function * 9129: html search: Show search summaries when html_copy_source = False * 9307: html search: Prevent corrections and completions in search field * 9120: html theme: Eliminate prompt characters of code-block from copyable text * 9176: i18n: Emit a debug message if message catalog file not found under :confval:`locale_dirs` * 9414: LaTeX: Add xeCJKVerbAddon to default fvset config for Chinese documents * 9016: linkcheck: Support checking anchors on github.com * 9016: linkcheck: Add a new event :event:`linkcheck-process-uri` to modify URIs before checking hyperlinks * 6525: linkcheck: Add :confval:`linkcheck_allowed_redirects` to mark hyperlinks that are redirected to expected URLs as "working" * 1874: py domain: Support union types using ``|`` in info-field-list * 9268: py domain: :confval:`python_use_unqualified_type_names` supports type field in info-field-list * 9097: Optimize the parallel build * 9131: Add :confval:`nitpick_ignore_regex` to ignore nitpicky warnings using regular expressions * 9174: Add ``Sphinx.set_html_assets_policy`` to tell extensions to include HTML assets in all the pages. Extensions can check this via ``Sphinx.registry.html_assets_policy`` * C++, add support for - ``inline`` variables, - ``consteval`` functions, - ``constinit`` variables, - ``char8_t``, - ``explicit(<constant expression>)`` specifier, - digit separators in literals, and - constraints in placeholder type specifiers, aka. adjective syntax (e.g., ``Sortable auto &v``). * C, add support for digit separators in literals. * 9166: LaTeX: support containers in LaTeX output Bugs fixed ---------- * 8872: autodoc: stacked singledispatches are wrongly rendered * 8597: autodoc: a docsting having metadata only should be treated as undocumented * 9185: autodoc: typehints for overloaded functions and methods are inaccurate * 9250: autodoc: The inherited method not having docstring is wrongly parsed * 9283: autodoc: autoattribute directive failed to generate document for an attribute not having any comment * 9364: autodoc: single element tuple on the default argument value is wrongly rendered * 9362: autodoc: AttributeError is raised on processing a subclass of Tuple[()] * 9404: autodoc: TypeError is raised on processing dict-like object (not a class) via autoclass directive * 9317: html: Pushing left key causes visiting the next page at the first page * 9381: html: URL for html_favicon and html_log does not work * 9270: html theme : pyramid theme generates incorrect logo links * 9217: manpage: The name of manpage directory that is generated by :confval:`man_make_section_directory` is not correct * 9350: manpage: Fix font isn't reset after keyword at the top of samp role * 9306: Linkcheck reports broken link when remote server closes the connection on HEAD request * 9280: py domain: "exceptions" module is not displayed * 9418: py domain: a Callable annotation with no parameters (e.g. ``Callable[[], None])`` will be rendered with a bracket missing (``Callable[], None]``) * 9319: quickstart: Make sphinx-quickstart exit when conf.py already exists * 9387: xml: XML Builder ignores custom visitors * 9224: ``:param:`` and ``:type:`` fields does not support a type containing whitespace (ex. ``Dict[str, str]``) * 8945: when transforming typed fields, call the specified role instead of making an single xref. For C and C++, use the ``expr`` role for typed fields. ``` ### 4.0.3 ``` ===================================== Features added -------------- * C, add C23 keywords ``_Decimal32``, ``_Decimal64``, and ``_Decimal128``. * 9354: C, add :confval:`c_extra_keywords` to allow user-defined keywords during parsing. * Revert the removal of ``sphinx.util:force_decode()`` to become some 3rd party extensions available again during 5.0 Bugs fixed ---------- * 9330: changeset domain: :rst:dir:`versionchanged` with contents being a list will cause error during pdf build * 9313: LaTeX: complex table with merged cells broken since 4.0 * 9305: LaTeX: backslash may cause Improper discretionary list pdf build error with Japanese engines * 9354: C, remove special macro names from the keyword list. See also :confval:`c_extra_keywords`. * 9322: KeyError is raised on PropagateDescDomain transform ``` ### 4.0.2 ``` ===================================== Dependencies ------------ * 9216: Support jinja2-3.0 Incompatible changes -------------------- * 9222: Update Underscore.js to 1.13.1 * 9217: manpage: Stop creating a section directory on build manpage by default (see :confval:`man_make_section_directory`) Bugs fixed ---------- * 9210: viewcode: crashed if non importable modules found on parallel build * 9240: Unknown node error for pending_xref_condition is raised if an extension that does not support the node installs a missing-reference handler ``` ### 4.0.1 ``` ===================================== Bugs fixed ---------- * 9189: autodoc: crashed when ValueError is raised on generating signature from a property of the class * 9188: autosummary: warning is emitted if list value is set to autosummary_generate * 8380: html search: tags for search result are broken * 9198: i18n: Babel emits errors when running compile_catalog * 9205: py domain: The :canonical: option causes "more than one target for cross-reference" warning * 9201: websupport: UndefinedError is raised: 'css_tag' is undefined ``` ### 4.0.0 ``` ===================================== Dependencies ------------ ``` ### 4.0.0b3 ``` * 9167: html: Failed to add CSS files to the specific page ``` ### 4.0.0b2 ``` * C, C++, fix ``KeyError`` when an ``alias`` directive is the first C/C++ directive in a file with another C/C++ directive later. ``` ### 4.0.0b1 ``` * 8917: autodoc: Raises a warning if function has wrong __globals__ value * 8415: autodoc: a TypeVar imported from other module is not resolved (in Python 3.7 or above) * 8992: autodoc: Failed to resolve types.TracebackType type annotation * 8905: html: html_add_permalinks=None and html_add_permalinks="" are ignored * 8380: html search: Paragraphs in search results are not identified as ``<p>`` * 8915: html theme: The translation of sphinx_rtd_theme does not work * 8342: Emit a warning if a unknown domain is given for directive or role (ex. ``:unknown:doc:``) * 7241: LaTeX: No wrapping for ``cpp:enumerator`` * 8711: LaTeX: backticks in code-blocks trigger latexpdf build warning (and font change) with late TeXLive 2019 * 8253: LaTeX: Figures with no size defined get overscaled (compared to images with size explicitly set in pixels) (fixed for ``'pdflatex'/'lualatex'`` only) * 8881: LaTeX: The depth of bookmarks panel in PDF is not enough for navigation * 8874: LaTeX: the fix to two minor Pygments LaTeXFormatter output issues ignore Pygments style * 8925: LaTeX: 3.5.0 ``verbatimmaxunderfull`` setting does not work as expected * 8980: LaTeX: missing line break in ``\pysigline`` * 8995: LaTeX: legacy ``\pysiglinewithargsret`` does not compute correctly available horizontal space and should use a ragged right style * 9009: LaTeX: "release" value with underscore leads to invalid LaTeX * 8911: C++: remove the longest matching prefix in :confval:`cpp_index_common_prefix` instead of the first that matches. * C, properly reject function declarations when a keyword is used as parameter name. * 8933: viewcode: Failed to create back-links on parallel build * 8960: C and C++, fix rendering of (member) function pointer types in function parameter lists. * C++, fix linking of names in array declarators, pointer to member (function) declarators, and in the argument to ``sizeof...``. * C, fix linking of names in array declarators. ``` ### 3.5.5 ``` ============================== ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: https://www.sphinx-doc.org/

Update pytest from 6.2.3 to 6.2.5.

Changelog ### 6.2.5 ``` ========================= Trivial/Internal Changes ------------------------ - `8494 <https://github.com/pytest-dev/pytest/issues/8494>`_: Python 3.10 is now supported. - `9040 <https://github.com/pytest-dev/pytest/issues/9040>`_: Enable compatibility with ``pluggy 1.0`` or later. ``` ### 6.2.4 ``` ========================= Bug Fixes --------- - `8539 <https://github.com/pytest-dev/pytest/issues/8539>`_: Fixed assertion rewriting on Python 3.10. ```
Links - PyPI: https://pypi.org/project/pytest - Changelog: https://pyup.io/changelogs/pytest/ - Homepage: https://docs.pytest.org/en/latest/

Update pytest-runner from 5.3.0 to 5.3.1.

Changelog ### 5.3.1 ``` ====== * Refreshed package metadata. ```
Links - PyPI: https://pypi.org/project/pytest-runner - Changelog: https://pyup.io/changelogs/pytest-runner/ - Repo: https://github.com/pytest-dev/pytest-runner/

Update pydicom from 2.1.2 to 2.2.1.

Changelog ### 2.2.1 ``` Bug fixes since 2.2.0 release ``` ### 2.2.0 ``` Some of the updates in pydicom 2.2.0 include: - a command-line interface was added with subcommands 'show' and 'codify'. - improvements or new methods for private tags, JSON handling, FileSets, and VRs of AT, DS, and PersonName. - improvements in color space conversion and RLE encoding/decoding. - Data dictionaries were updated to version 2021b of the DICOM Standard There were many bug fixes and other changes; see the [release notes](https://pydicom.github.io/pydicom/stable/release_notes/index.html#version-2-2-0) for full details of changes, additions, and bug fixes. ``` ### 2.2.0rc.1 ``` Release candidate for version 2.2.0. ```
Links - PyPI: https://pypi.org/project/pydicom - Changelog: https://pyup.io/changelogs/pydicom/ - Repo: https://github.com/pydicom/pydicom/archive/master.zip

Update flake8 from 3.9.1 to 3.9.2.

Changelog ### 3.9.2 ``` ------------------- You can view the `3.9.2 milestone`_ on GitHub for more details. Bugs Fixed ~~~~~~~~~~ - Fix error message for ``E111`` in ``pycodestyle`` (See also :pull:`1328`, :issue:`1327`). Deprecations ~~~~~~~~~~~~ - ``indent_size_str`` is deprecated, use ``str(indent_size)`` instead (See also :pull:`1328`, :issue:`1327`). .. all links .. _3.9.2 milestone: https://github.com/PyCQA/flake8/milestone/40 ```
Links - PyPI: https://pypi.org/project/flake8 - Changelog: https://pyup.io/changelogs/flake8/ - Repo: https://gitlab.com/pycqa/flake8

Update pip from 21.1.1 to 21.2.4.

Changelog ### 21.2.4 ``` =================== Bug Fixes --------- - Fix 3.6.0 compatibility in link comparison logic. (`10280 <https://github.com/pypa/pip/issues/10280>`_) ``` ### 21.2.3 ``` =================== Bug Fixes --------- - Modify the ``sysconfig.get_preferred_scheme`` function check to be compatible with CPython 3.10’s alphareleases. (`10252 <https://github.com/pypa/pip/issues/10252>`_) ``` ### 21.2.2 ``` =================== Bug Fixes --------- - New resolver: When a package is specified with extras in constraints, and with extras in non-constraint requirements, the resolver now correctly identifies the constraint's existence and avoids backtracking. (`10233 <https://github.com/pypa/pip/issues/10233>`_) ``` ### 21.2.1 ``` =================== Process ------- - The source distribution re-installation feature removal has been delayed to 21.3. ``` ### 21.2 ``` ================= Process ------- - ``pip freeze``, ``pip list``, and ``pip show`` no longer normalize underscore (``_``) in distribution names to dash (``-``). This is a side effect of the migration to ``importlib.metadata``, since the underscore-dash normalization behavior is non-standard and specific to setuptools. This should not affect other parts of pip (for example, when feeding the ``pip freeze`` result back into ``pip install``) since pip internally performs standard PEP 503 normalization independently to setuptools. Deprecations and Removals ------------------------- - Git version parsing is now done with regular expression to prepare for the pending upstream removal of non-PEP-440 version parsing logic. (`10117 <https://github.com/pypa/pip/issues/10117>`_) - Re-enable the "Value for ... does not match" location warnings to field a new round of feedback for the ``distutils``-``sysconfig`` transition. (`10151 <https://github.com/pypa/pip/issues/10151>`_) - Remove deprecated ``--find-links`` option in ``pip freeze`` (`9069 <https://github.com/pypa/pip/issues/9069>`_) Features -------- - New resolver: Loosen URL comparison logic when checking for direct URL reference equivalency. The logic includes the following notable characteristics: * The authentication part of the URL is explicitly ignored. * Most of the fragment part, including ``egg=``, is explicitly ignored. Only ``subdirectory=`` and hash values (e.g. ``sha256=``) are kept. * The query part of the URL is parsed to allow ordering differences. (`10002 <https://github.com/pypa/pip/issues/10002>`_) - Support TOML v1.0.0 syntax in ``pyproject.toml``. (`10034 <https://github.com/pypa/pip/issues/10034>`_) - Added a warning message for errors caused due to Long Paths being disabled on Windows. (`10045 <https://github.com/pypa/pip/issues/10045>`_) - Change the encoding of log file from default text encoding to UTF-8. (`10071 <https://github.com/pypa/pip/issues/10071>`_) - Log the resolved commit SHA when installing a package from a Git repository. (`10149 <https://github.com/pypa/pip/issues/10149>`_) - Add a warning when passing an invalid requirement to ``pip uninstall``. (`4958 <https://github.com/pypa/pip/issues/4958>`_) - Add new subcommand ``pip index`` used to interact with indexes, and implement ``pip index version`` to list available versions of a package. (`7975 <https://github.com/pypa/pip/issues/7975>`_) - When pip is asked to uninstall a project without the dist-info/RECORD file it will no longer traceback with FileNotFoundError, but it will provide a better error message instead, such as:: ERROR: Cannot uninstall foobar 0.1, RECORD file not found. You might be able to recover from this via: 'pip install --force-reinstall --no-deps foobar==0.1'. When dist-info/INSTALLER is present and contains some useful information, the info is included in the error message instead:: ERROR: Cannot uninstall foobar 0.1, RECORD file not found. Hint: The package was installed by rpm. (`8954 <https://github.com/pypa/pip/issues/8954>`_) - Add an additional level of verbosity. ``--verbose`` (and the shorthand ``-v``) now contains significantly less output, and users that need complete full debug-level output should pass it twice (``--verbose --verbose`` or ``-vv``). (`9450 <https://github.com/pypa/pip/issues/9450>`_) - New resolver: The order of dependencies resolution has been tweaked to traverse the dependency graph in a more breadth-first approach. (`9455 <https://github.com/pypa/pip/issues/9455>`_) - Make "yes" the default choice in ``pip uninstall``'s prompt. (`9686 <https://github.com/pypa/pip/issues/9686>`_) - Add a special error message when users forget the ``-r`` flag when installing. (`9915 <https://github.com/pypa/pip/issues/9915>`_) - New resolver: A distribution's ``Requires-Python`` metadata is now checked before its Python dependencies. This makes the resolver fail quicker when there's an interpreter version conflict. (`9925 <https://github.com/pypa/pip/issues/9925>`_) - Suppress "not on PATH" warning when ``--prefix`` is given. (`9931 <https://github.com/pypa/pip/issues/9931>`_) - Include ``rustc`` version in pip's ``User-Agent``, when the system has ``rustc``. (`9987 <https://github.com/pypa/pip/issues/9987>`_) Bug Fixes --------- - Update vendored six to 1.16.0 and urllib3 to 1.26.5 (`10043 <https://github.com/pypa/pip/issues/10043>`_) - Correctly allow PEP 517 projects to be detected without warnings in ``pip freeze``. (`10080 <https://github.com/pypa/pip/issues/10080>`_) - Strip leading slash from a ``file://`` URL built from an path with the Windows drive notation. This fixes bugs where the ``file://`` URL cannot be correctly used as requirement, constraint, or index URLs on Windows. (`10115 <https://github.com/pypa/pip/issues/10115>`_) - New resolver: URL comparison logic now treats ``file://localhost/`` and ``file:///`` as equivalent to conform to RFC 8089. (`10162 <https://github.com/pypa/pip/issues/10162>`_) - Prefer credentials from the URL over the previously-obtained credentials from URLs of the same domain, so it is possible to use different credentials on the same index server for different ``--extra-index-url`` options. (`3931 <https://github.com/pypa/pip/issues/3931>`_) - Fix extraction of files with utf-8 encoded paths from tars. (`7667 <https://github.com/pypa/pip/issues/7667>`_) - Skip distutils configuration parsing on encoding errors. (`8931 <https://github.com/pypa/pip/issues/8931>`_) - New resolver: Detect an unnamed requirement is user-specified (by building its metadata for the project name) so it can be correctly ordered in the resolver. (`9204 <https://github.com/pypa/pip/issues/9204>`_) - Fix :ref:`pip freeze` to output packages :ref:`installed from git <vcs support>` in the correct ``git+protocol://git.example.com/MyProjectegg=MyProject`` format rather than the old and no longer supported ``git+git`` format. (`9822 <https://github.com/pypa/pip/issues/9822>`_) - Fix warnings about install scheme selection for Python framework builds distributed by Apple's Command Line Tools. (`9844 <https://github.com/pypa/pip/issues/9844>`_) - Relax interpreter detection to quelch a location mismatch warning where PyPy is deliberately breaking backwards compatibility. (`9845 <https://github.com/pypa/pip/issues/9845>`_) Vendored Libraries ------------------ - Upgrade certifi to 2021.05.30. - Upgrade idna to 3.2. - Upgrade packaging to 21.0 - Upgrade requests to 2.26.0. - Upgrade resolvelib to 0.7.1. - Upgrade urllib3 to 1.26.6. ``` ### 21.1.3 ``` =================== Bug Fixes --------- - Remove unused optional ``tornado`` import in vendored ``tenacity`` to prevent old versions of Tornado from breaking pip. (`10020 <https://github.com/pypa/pip/issues/10020>`_) - Require ``setup.cfg``-only projects to be built via PEP 517, by requiring an explicit dependency on setuptools declared in pyproject.toml. (`10031 <https://github.com/pypa/pip/issues/10031>`_) ``` ### 21.1.2 ``` =================== Bug Fixes --------- - New resolver: Correctly exclude an already installed package if its version is known to be incompatible to stop the dependency resolution process with a clear error message. (`9841 <https://github.com/pypa/pip/issues/9841>`_) - Allow ZIP to archive files with timestamps earlier than 1980. (`9910 <https://github.com/pypa/pip/issues/9910>`_) - Emit clearer error message when a project root does not contain either ``pyproject.toml``, ``setup.py`` or ``setup.cfg``. (`9944 <https://github.com/pypa/pip/issues/9944>`_) - Fix detection of existing standalone pip instance for PEP 517 builds. (`9953 <https://github.com/pypa/pip/issues/9953>`_) ```
Links - PyPI: https://pypi.org/project/pip - Changelog: https://pyup.io/changelogs/pip/ - Homepage: https://pip.pypa.io/

Update tox from 3.23.0 to 3.24.3.

Changelog ### 3.24.3 ``` Bugfixes ^^^^^^^^ - ``--parallel`` reports now show ASCII OK/FAIL/SKIP lines when full Unicode output is not available - by :user:`brettcs` `1421 <https://github.com/tox-dev/tox/issues/1421>`_ Miscellaneous ^^^^^^^^^^^^^ - Started enforcing valid references in Sphinx docs -- :user:`webknjaz` `2168 <https://github.com/tox-dev/tox/issues/2168>`_ ``` ### 3.24.2 ``` -------------------- Bugfixes ^^^^^^^^ - include ``LC_ALL`` to implicit list of passenv variables - by :user:`ssbarnea` `2162 <https://github.com/tox-dev/tox/issues/2162>`_ ``` ### 3.24.1 ``` -------------------- Bugfixes ^^^^^^^^ - ``get_requires_for_build_sdist`` hook (PEP 517) is assumed to return an empty list if left unimplemented by the backend build system - by :user:`oczkoisse` `2130 <https://github.com/tox-dev/tox/issues/2130>`_ Documentation ^^^^^^^^^^^^^ - The documentation of ``install_command`` now also mentions that you can provide arbitrary commands - by :user:`jugmac00` `2081 <https://github.com/tox-dev/tox/issues/2081>`_ ``` ### 3.24.0 ``` -------------------- Bugfixes ^^^^^^^^ - ``--devenv`` no longer modifies the directory in which the ``.tox`` environment is provisioned - by :user:`isaac-ped` `2065 <https://github.com/tox-dev/tox/issues/2065>`_ - Fix show config when the package names are not in canonical form - by :user:`gaborbernat`. `2103 <https://github.com/tox-dev/tox/issues/2103>`_ Documentation ^^^^^^^^^^^^^ - Extended environment variables section - by :user:`majiang` `2036 <https://github.com/tox-dev/tox/issues/2036>`_ Miscellaneous ^^^^^^^^^^^^^ - ``tox`` no longer shows deprecation warnings for ``distutils.sysconfig`` on Python 3.10 - by :user:`9999years` `2100 <https://github.com/tox-dev/tox/issues/2100>`_ ``` ### 3.23.1 ``` -------------------- Bugfixes ^^^^^^^^ - Distinguish between normal Windows Python and MSYS2 Python when looking for virtualenv executable path. Adds os.sep to :class:`~tox.interpreters.InterpreterInfo` - by :user:`jschwartzentruber` `1982 <https://github.com/tox-dev/tox/issues/1982>`_ - Fix a ``tox-conda`` isolation build bug - by :user:`AntoineD`. `2056 <https://github.com/tox-dev/tox/issues/2056>`_ Documentation ^^^^^^^^^^^^^ - Update examples in the documentation to use ``setenv`` in the ``[testenv]`` sections, not wrongly in the ``[tox]`` main section. - by :user:`AndreyNautilus` `1999 <https://github.com/tox-dev/tox/issues/1999>`_ Miscellaneous ^^^^^^^^^^^^^ - Enable building tox with ``setuptools_scm`` 6+ by :user:`hroncok` `1984 <https://github.com/tox-dev/tox/issues/1984>`_ ```
Links - PyPI: https://pypi.org/project/tox - Changelog: https://pyup.io/changelogs/tox/ - Docs: http://tox.readthedocs.org

Update twine from 3.4.1 to 3.4.2.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/twine - Docs: https://twine.readthedocs.io/

Update watchdog from 2.0.3 to 2.1.5.

Changelog ### 2.1.5 ``` ~~~~~ 2021-08-23 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.1.4...v2.1.5>`__ - Fix regression introduced in 2.1.4 (reverted "Allow overriding or adding custom event handlers to event dispatch map. (`814 <https://github.com/gorakhargosh/watchdog/pull/814>`_)"). (`#830 <https://github.com/gorakhargosh/watchdog/pull/830>`_) - Convert regexes of type ``str`` to ``list``. (`831 <https://github.com/gorakhargosh/watchdog/pull/831>`_) - Thanks to our beloved contributors: unique1o1, BoboTiG ``` ### 2.1.4 ``` ~~~~~ 2021-08-19 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.1.3...v2.1.4>`__ - [watchmedo] Fix usage of ``os.setsid()`` and ``os.killpg()`` Unix-only functions. (`809 <https://github.com/gorakhargosh/watchdog/pull/809>`_) - [mac] Fix missing ``FileModifiedEvent`` on permission or ownership changes of a file. (`815 <https://github.com/gorakhargosh/watchdog/pull/815>`_) - [mac] Convert absolute watch path in ``FSEeventsEmitter`` with ``os.path.realpath()``. (`822 <https://github.com/gorakhargosh/watchdog/pull/822>`_) - Fix a possible ``AttributeError`` in ``SkipRepeatsQueue._put()``. (`818 <https://github.com/gorakhargosh/watchdog/pull/818>`_) - Allow overriding or adding custom event handlers to event dispatch map. (`814 <https://github.com/gorakhargosh/watchdog/pull/814>`_) - Fix tests on big endian platforms. (`828 <https://github.com/gorakhargosh/watchdog/pull/828>`_) - Thanks to our beloved contributors: replabrobin, BoboTiG, SamSchott, AndreiB97, NiklasRosenstein, ikokollari, mgorny ``` ### 2.1.3 ``` ~~~~~ 2021-06-26 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.1.2...v2.1.3>`__ - Publish macOS ``arm64`` and ``universal2`` wheels. (`740 <https://github.com/gorakhargosh/watchdog/pull/740>`_) - Thanks to our beloved contributors: kainjow, BoboTiG ``` ### 2.1.2 ``` ~~~~~ 2021-05-19 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.1.1...v2.1.2>`__ - [mac] Fix relative path handling for non-recursive watch. (`797 <https://github.com/gorakhargosh/watchdog/pull/797>`_) - [windows] On PyPy, events happening right after ``start()`` were missed. Add a workaround for that. (`796 <https://github.com/gorakhargosh/watchdog/pull/796>`_) - Thanks to our beloved contributors: oprypin, CCP-Aporia, BoboTiG ``` ### 2.1.1 ``` ~~~~~ 2021-05-10 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.1.0...v2.1.1>`__ - [mac] Fix callback exceptions when the watcher is deleted but still receiving events (`786 <https://github.com/gorakhargosh/watchdog/pull/786>`_) - Thanks to our beloved contributors: rom1win, BoboTiG, CCP-Aporia ``` ### 2.1.0 ``` ~~~~~ 2021-05-04 • `full history <https://github.com/gorakhargosh/watchdog/compare/v2.0.3...v2.1.0>`__ - [inotify] Simplify ``libc`` loading (`776 <https://github.com/gorakhargosh/watchdog/pull/776>`_) - [mac] Add support for non-recursive watches in ``FSEventsEmitter`` (`779 <https://github.com/gorakhargosh/watchdog/pull/779>`_) - [watchmedo] Add support for ``--debug-force-*`` arguments to ``tricks`` (`781 <https://github.com/gorakhargosh/watchdog/pull/781>`_) - Thanks to our beloved contributors: CCP-Aporia, aodj, UnitedMarsupials, BoboTiG ```
Links - PyPI: https://pypi.org/project/watchdog - Changelog: https://pyup.io/changelogs/watchdog/ - Repo: https://github.com/gorakhargosh/watchdog - Docs: https://pythonhosted.org/watchdog/

Update pre-commit from 2.12.1 to 2.15.0.

Changelog ### 2.15.0 ``` =================== Features - add support for hooks written in `dart`. - 2027 PR by asottile. - add support for `post-rewrite` hooks. - 2036 PR by uSpike. - 2035 issue by uSpike. Fixes - fix `check-useless-excludes` with exclude matching broken symlink. - 2029 PR by asottile. - 2019 issue by pkoch. - eliminate duplicate mutable sha warning messages for `pre-commit autoupdate`. - 2030 PR by asottile. - 2010 issue by graingert. ``` ### 2.14.1 ``` =================== Fixes - fix force-push of disparate histories using git>=2.28. - 2005 PR by asottile. - 2002 issue by bogusfocused. - fix `check-useless-excludes` and `check-hooks-apply` matching non-root `.pre-commit-config.yaml`. - 2026 PR by asottile. - pre-commit-ci/issues84 issue by billsioros. ``` ### 2.14.0 ``` =================== Features - During `pre-push` hooks, expose local branch as `PRE_COMMIT_LOCAL_BRANCH`. - 1947 PR by FlorentClarret. - 1410 issue by MaicoTimmerman. - Improve container id detection for docker-beside-docker with custom hostname. - 1919 PR by adarnimrod. - 1918 issue by adarnimrod. Fixes - Read legacy hooks in an encoding-agnostic way. - 1943 PR by asottile. - 1942 issue by sbienkow-ninja. - Fix execution of docker hooks for docker-in-docker. - 1997 PR by asottile. - 1978 issue by robin-moss. ``` ### 2.13.0 ``` =================== Features - Setting `SKIP=...` skips installation as well. - 1875 PR by asottile. - pre-commit-ci/issues53 issue by TylerYep. - Attempt to mount from host with docker-in-docker. - 1888 PR by okainov. - 1387 issue by okainov. - Enable `repo: local` for `r` hooks. - 1878 PR by lorenzwalthert. - Upgrade `ruby-build` and `rbenv`. - 1913 PR by jalessio. Fixes - Better detect `r` packages. - 1898 PR by lorenzwalthert. - Avoid warnings with mismatched `renv` versions. - 1841 PR by lorenzwalthert. - Reproducibly produce ruby tar resources. - 1915 PR by asottile. ```
Links - PyPI: https://pypi.org/project/pre-commit - Changelog: https://pyup.io/changelogs/pre-commit/ - Repo: https://github.com/pre-commit/pre-commit

Update beautifulsoup4 from 4.9.3 to 4.10.0.

Changelog ### 4.10.0 ``` * This is the first release of Beautiful Soup to only support Python 3. I dropped Python 2 support to maintain support for newer versions (58 and up) of setuptools. See: https://github.com/pypa/setuptools/issues/2769 [bug=1942919] * The behavior of methods like .get_text() and .strings now differs depending on the type of tag. The change is visible with HTML tags like <script>, <style>, and <template>. Starting in 4.9.0, methods like get_text() returned no results on such tags, because the contents of those tags are not considered 'text' within the document as a whole. But a user who calls script.get_text() is working from a different definition of 'text' than a user who calls div.get_text()--otherwise there would be no need to call script.get_text() at all. In 4.10.0, the contents of (e.g.) a <script> tag are considered 'text' during a get_text() call on the tag itself, but not considered 'text' during a get_text() call on the tag's parent. Because of this change, calling get_text() on each child of a tag may now return a different result than calling get_text() on the tag itself. That's because different tags now have different understandings of what counts as 'text'. [bug=1906226] [bug=1868861] * NavigableString and its subclasses now implement the get_text() method, as well as the properties .strings and .stripped_strings. These methods will either return the string itself, or nothing, so the only reason to use this is when iterating over a list of mixed Tag and NavigableString objects. [bug=1904309] * The 'html5' formatter now treats attributes whose values are the empty string as HTML boolean attributes. Previously (and in other formatters), an attribute value must be set as None to be treated as a boolean attribute. In a future release, I plan to also give this behavior to the 'html' formatter. Patch by Isaac Muse. [bug=1915424] * The 'replace_with()' method now takes a variable number of arguments, and can be used to replace a single element with a sequence of elements. Patch by Bill Chandos. [rev=605] * Corrected output when the namespace prefix associated with a namespaced attribute is the empty string, as opposed to None. [bug=1915583] * Performance improvement when processing tags that speeds up overall tree construction by 2%. Patch by Morotti. [bug=1899358] * Corrected the use of special string container classes in cases when a single tag may contain strings with different containers; such as the <template> tag, which may contain both TemplateString objects and Comment objects. [bug=1913406] * The html.parser tree builder can now handle named entities found in the HTML5 spec in much the same way that the html5lib tree builder does. Note that the lxml HTML tree builder doesn't handle named entities this way. [bug=1924908] * Added a second way to pass specify encodings to UnicodeDammit and EncodingDetector, based on the order of precedence defined in the HTML5 spec, starting at: https://html.spec.whatwg.org/multipage/parsing.html#parsing-with-a-known-character-encoding Encodings in 'known_definite_encodings' are tried first, then byte-order-mark sniffing is run, then encodings in 'user_encodings' are tried. The old argument, 'override_encodings', is now a deprecated alias for 'known_definite_encodings'. This changes the default behavior of the html.parser and lxml tree builders, in a way that may slightly improve encoding detection but will probably have no effect. [bug=1889014] * Improve the warning issued when a directory name (as opposed to the name of a regular file) is passed as markup into the BeautifulSoup constructor. [bug=1913628] ```
Links - PyPI: https://pypi.org/project/beautifulsoup4 - Changelog: https://pyup.io/changelogs/beautifulsoup4/ - Homepage: http://www.crummy.com/software/BeautifulSoup/bs4/

Update requests from 2.25.1 to 2.26.0.

Changelog ### 2.26.0 ``` ------------------- **Improvements** - Requests now supports Brotli compression, if either the `brotli` or `brotlicffi` package is installed. (5783) - `Session.send` now correctly resolves proxy configurations from both the Session and Request. Behavior now matches `Session.request`. (5681) **Bugfixes** - Fixed a race condition in zip extraction when using Requests in parallel from zip archive. (5707) **Dependencies** - Instead of `chardet`, use the MIT-licensed `charset_normalizer` for Python3 to remove license ambiguity for projects bundling requests. If `chardet` is already installed on your machine it will be used instead of `charset_normalizer` to keep backwards compatibility. (5797) You can also install `chardet` while installing requests by specifying `[use_chardet_on_py3]` extra as follows: shell pip install "requests[use_chardet_on_py3]" Python2 still depends upon the `chardet` module. - Requests now supports `idna` 3.x on Python 3. `idna` 2.x will continue to be used on Python 2 installations. (5711) **Deprecations** - The `requests[security]` extra has been converted to a no-op install. PyOpenSSL is no longer the recommended secure option for Requests. (5867) - Requests has officially dropped support for Python 3.5. (5867) ```
Links - PyPI: https://pypi.org/project/requests - Changelog: https://pyup.io/changelogs/requests/ - Docs: https://requests.readthedocs.io
pyup-bot commented 3 years ago

Closing this in favor of #65