Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4
the first commit has an added context manager to the multiprocess manager
in an attempt to apply best practices for that just in case it interacts w/ those out of memory errors
the second commit is formatting (update docs, logs, indentation)
I do have some untracked files that I wasn't sure were supposed to be committed though:
tests/input_data/test_swap_file.h5
tests/input_data/test_swap_file_SenseSwapped.HDF5
the first commit has an added context manager to the multiprocess manager in an attempt to apply best practices for that just in case it interacts w/ those out of memory errors
the second commit is formatting (update docs, logs, indentation)
I do have some untracked files that I wasn't sure were supposed to be committed though: tests/input_data/test_swap_file.h5 tests/input_data/test_swap_file_SenseSwapped.HDF5
testing