Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4
move output files from the code directory to the data folder
data and code should be separated
use this to simplify the directory structures
there appears to be extra input arguments for output folders that have a complicated older structure
you could replace all of it with one top level output and then create the necessary folders there
move output files from the code directory to the data folder
data and code should be separated
use this to simplify the directory structures there appears to be extra input arguments for output folders that have a complicated older structure you could replace all of it with one top level output and then create the necessary folders there