skembel picante issues - Githubissues

skembel / picante

R tools for integrating phylogenies and ecology

33 stars 17 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

initial values for "corSymm" must be between -1 and 1

#37 sapuizait opened 6 months ago
2
node.age error in ses.pd function

#36 pabuveery opened 10 months ago
1
Hello, I believe I have a serious issue.

#35 sixgodliusen closed 9 months ago
1
This is an update of the phyEstimate functions

#34 kerby1998 closed 1 year ago
0
phyEstimateDisc vs phyEstimate: xtfrm.data.frame(x) : cannot xtfrm data frames

#33 alrichardbollans opened 1 year ago
7
Error in randomizeMatrix

#32 Angelly057 closed 8 months ago
2
How to calculate beta NRI and NTI in picante

#31 liaoyunshi opened 1 year ago
0
Enhance performance of comdist

#30 Antguz opened 1 year ago
1
PD rooted/unrooted NULL error

#29 damioresegun closed 1 year ago
3
rarefaction and PD?

#28 marwa38 closed 2 years ago
2
trialswap and independentswap algorithms don't preserve sample species richness

#27 joelnitta closed 2 years ago
5
randomizeMatrix with null.model = "independentswap" fails on small communities

#26 joelnitta closed 2 years ago
2
Error in dimnames(x) <- dnx : 'dimnames' applied to non-array

#25 Tom-python0121 opened 3 years ago
5
Phylogeny input file

#24 carolinapinapaez closed 2 years ago
1
Faulty assumption in node.age picks wrong root

#23 FlukeAndFeather closed 4 years ago
1
Difference between richness and sample.pool null.model in ses.mpd/ses.pd/ses.mntd ?

#22 gowachin closed 2 years ago
2
Feature request: biplot for Inter-Community Mean Pairwise Distance for traits data

#21 Jigyasa3 closed 4 years ago
1
Can AITCHISON distance be used in MNTD and MPD calculations?

#20 Jigyasa3 closed 4 years ago
1
Can monophyletic taxa in the tree be used as groups for differential testing?

#19 Jigyasa3 closed 4 years ago
1
bug in `pblmpredict` when argument `predict.originals` is TRUE

#18 guiblanchet closed 4 years ago
3
Bug in ses.pd function

#17 rafmolven closed 5 years ago
3
Wrap lines in vignette

#16 colinbrislawn closed 5 years ago
0
abundance weighted PD

#15 wcornwell opened 5 years ago
2
Strange PD results

#14 Greblica closed 6 years ago
1
Long lines are cut off in vignette PDF

#13 colinbrislawn closed 5 years ago
2
pd cannot use ultrametric tree(?)

#12 sagitaninta closed 5 years ago
1
Update match.comm.dist

#11 daijiang closed 6 years ago
0
Update MPD calculation to offer option to include/exclude intra-species distances

#10 skembel opened 7 years ago
0
Kcalc and phylosignal fail if the supplied data are not a vector

#9 skembel opened 7 years ago
0
match.phylo.data fails when given a data.frame with a single column

#8 skembel closed 1 year ago
1
Modifications to pd() function to improve speed

#7 mmuscarella closed 7 years ago
1
edit psc and add scale toggle

#6 mrhelmus closed 8 years ago
0
correct abundance weighted mpd

#5 leorjorge closed 7 years ago
1
abundance weighted MPD error

#4 leorjorge closed 5 years ago
2
fix issue #1 matrix2sample fails if rownames missing

#3 jarioksa closed 8 years ago
0
Make picante pass R CMD check

#2 jarioksa closed 8 years ago
0
matrix2sample fails if rownames missing

#1 skembel closed 8 years ago
2