seed in snakemake workflow is now called train_seed, with introduction of a new sample_seed.
Progression of commits for sanity checking:
Renaming of test_data files to conform to new naming of sample files from ...<fold>_<train_seed>... to ...<fold>_<train_seed>_<sample_seed>..., with seed in sample_molecules_RNN set to train_seed (previously just called seed) to replicate old behavior.
sample_molecules_RNN now uses the correct seed (sample_seed). Files in test_data updated based on output of a run of test_snakemake.py after this change.
Sample seeds for sampling step. See new dag here.
seedinsnakemakeworkflow is now calledtrain_seed, with introduction of a newsample_seed.Progression of commits for sanity checking:
Renaming of
test_datafiles to conform to new naming of sample files from...<fold>_<train_seed>...to...<fold>_<train_seed>_<sample_seed>..., with seed insample_molecules_RNNset totrain_seed(previously just calledseed) to replicate old behavior.sample_molecules_RNNnow uses the correct seed (sample_seed). Files intest_dataupdated based on output of a run oftest_snakemake.pyafter this change.