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skjerns / AutoSleepScorer

An open-source sleep stage classification Python package
GNU Affero General Public License v3.0
103 stars 22 forks source link

Cannot open 'cnn.hdf5' 'rnn.hdf5' #2

Closed cjpark87 closed 6 years ago

cjpark87 commented 6 years ago

I am trying to run the example code you posted in README.md. But, when loading the model hdf5 file, it shows an error.

File "h5py/h5f.pyx", line 78, in h5py.h5f.open OSError: Unable to open file (file signature not found)

It seems like the model files are corrupted when I try to run "h5debug cnn.hdf5".

HDF5-DIAG: Error detected in HDF5 (1.8.16) thread 139994803136256:

000: ../../../src/H5F.c line 604 in H5Fopen(): unable to open file

major: File accessibilty
minor: Unable to open file

001: ../../../src/H5Fint.c line 1087 in H5F_open(): unable to read superblock

major: File accessibilty
minor: Read failed

002: ../../../src/H5Fsuper.c line 277 in H5F_super_read(): file signature not found

major: File accessibilty
minor: Not an HDF5 file

cannot open file

Could you check the model files again?

FYI, I am running your code in Ubuntu 16.04 with python3

skjerns commented 6 years ago

I fixed the links. should work now. Re-clone to get the new links.