The .msp.tsv file - Githubissues

slowkoni / rfmix

RFMIX - Local Ancestry and Admixture Inference Version 2

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Closed rozaimirazali closed 5 years ago

rozaimirazali commented 5 years ago

Does anyone know why there are two columns per sample? For example

chm spos epos sgpos egpos n snps QGP0001.0 QGP0001.1 QGP0002.0 QGP0002.1

rozaimirazali commented 5 years ago

I think i got it.

It seems that RFMix assigns local ancestry to each allele for every haplotype