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slowkow / proxysnps

:bookmark: Get SNP proxies from the 1000 Genomes Project.
MIT License
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Use Ensembl REST API instead #10

Closed slowkow closed 4 years ago

slowkow commented 5 years ago

http://grch37.rest.ensembl.org/documentation/info/ld_region_get

Computes and returns LD values between all pairs of variants in the defined region.

http://grch37.rest.ensembl.org/documentation/info/ld_id_get

Computes and returns LD values between the given variant and all other variants in a window centered around the given variant. The window size is set to 500 kb.

slowkow commented 4 years ago

I don't know if there is any need for proxysnps any more, since the Ensembl API seems to work well.

See an example of how to use the API in #15