slowkow / proxysnps

:bookmark: Get SNP proxies from the 1000 Genomes Project.
MIT License
28 stars 9 forks source link

INDELs are not queried properly #2

Open yluo86 opened 7 years ago

yluo86 commented 7 years ago

Hi,

I noticed that when I query an indel (e.g. get_proxies(query = "rs148722713")), get_proxies() identifies a wrong SNP (rs1467204) to query and still returns a set of variants and their LD values associated with the wrong variant.

Thanks, Yang