smangul1 / ec

This project includes simulated and 'golden standard' datasets, software and scripts that we used to benchmark error correction tools
https://smangul1.github.io/ec/
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Racer and reptile #9

Closed smangul1 closed 7 years ago

smangul1 commented 7 years ago

-for S1 and T2, T3 -add instructions how to install and run

smangul1 commented 7 years ago

Look here for kmer size https://github.com/smangul1/ec

smangul1 commented 7 years ago

Any updates here? For T2 please use : k=18 genome size=405000 log4(405*1000)X2=18

kahsieh commented 7 years ago

The S1 and T2 data are still running

smangul1 commented 7 years ago

Can you please update the table by putting your name so we know that you are running https://github.com/smangul1/ec/wiki/Running-tools

kahsieh commented 7 years ago

Done

smangul1 commented 7 years ago

great! can you please put the the path to the results in the table

kahsieh commented 7 years ago

Ok, I will do so once they finish running

smangul1 commented 7 years ago

Can you put just you and an say "in progress"

kahsieh commented 7 years ago

Ok