I donot want to output a temporary file. Here is what I did:
cat /mnt/*.fa|gem-indexer -i -o newsuper
cat /mnt/*.fa|gem-indexer -o newsuper
cat /mnt/*.fa|gem-indexer -i - -o newsuper
But none of them worked. Could please help me with it?
I'm afraid you will have to create this temporal file. The gem-indexer executes a rewind of the input file, so it needs it to be stored (so it can be read twice).
I donot want to output a temporary file. Here is what I did: cat /mnt/*.fa|gem-indexer -i -o newsuper cat /mnt/*.fa|gem-indexer -o newsuper cat /mnt/*.fa|gem-indexer -i - -o newsuper But none of them worked. Could please help me with it?