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smart-on-fhir / cumulus-etl

Extract FHIR data, Transform with NLP and DEID tools, and then Load FHIR data into a SQL Database for analysis
https://docs.smarthealthit.org/cumulus/etl
Apache License 2.0
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Docs: custom CTakes mode #217

Closed dogversioning closed 1 year ago

dogversioning commented 1 year ago

i looked around and i didn't find any user-facing documentation around https://github.com/smart-on-fhir/cumulus-etl/pull/183 - we might want to have a paragraph someplace?

mikix commented 1 year ago

I'm guessing this would take the form of documenting the chart-review command, including its custom-dictionary options.

mikix commented 1 year ago

I think is closed with #222 landing - see https://github.com/smart-on-fhir/cumulus-etl/blob/main/docs/chart-review.md#custom-nlp-dictionaries