Updates to the clean arg group (really only used by us, and infrequently) to adapt to prefixes in manifests, and cleaning up dangling old tables/user created tables.
Updates supporting i2b2 injestion
Moved encounter coding output to link to denormalized tables
Added static table for encounter class display fields
Fixed namespace class vs display distinction
Checklist
[X] Consider if documentation (like in docs/) needs to be updated
[X] Consider if tests should be added
[X] Run pylint if you're making changes beyond adding studies
[X] Update template repo if there are changes to study configuration
This PR makes the following changes:
cleanarg group (really only used by us, and infrequently) to adapt to prefixes in manifests, and cleaning up dangling old tables/user created tables.Checklist
docs/) needs to be updated