smcclatchy / mapping

Quantitative Trait Mapping Lesson
https://smcclatchy.github.io/mapping/
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kinship episode #10

Open smcclatchy opened 5 years ago

smcclatchy commented 5 years ago

kinship = proportion of shared alleles between individuals heatmap(kinship[1:20, 1:20], symm = TRUE) some individuals don't appear to be related to self because they are highly heterozygous, thus don't share alleles with self; each chromosome doesn't share alleles with its partner discuss with your partner why diagonal doesn't equal 1, and the relationship between this and homo and heterozygosity