smcclatchy / studyGroup

A data science study group for The Jackson Laboratory and nearby institutions.
http://smcclatchy.github.io/studyGroup/
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High Performance Computing #41

Closed smcclatchy closed 6 years ago

smcclatchy commented 7 years ago

Location TBD, Farmington 12 June 2017 09:00:00 AM JAX employees only Workshop website

The Unix Shell

The Unix shell has been around longer than most of its users have been alive. It has survived so long because it’s a power tool that allows people to do complex things with just a few keystrokes. More importantly, it helps them combine existing programs in new ways and automate repetitive tasks so they aren’t typing the same things over and over again. Use of the shell is fundamental to using a wide range of other powerful tools and computing resources (including “high-performance computing” supercomputers). These lessons will start you on a path towards using these resources effectively.

Prerequisites

This lesson guides you through the basics of file systems and the shell. If you have stored files on a computer at all and recognize the word “file” and either “directory” or “folder” (two common words for the same thing), you’re ready for this lesson.

If you’re already comfortable manipulating files and directories, searching for files with grep and find, and writing simple loops and scripts, you probably won’t learn much from this lesson.