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smdabdoub / kraken-biom

Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
MIT License
47 stars 16 forks source link

Fix taxonomy parsing #9

Closed ressy closed 6 years ago

ressy commented 6 years ago

This replaces the taxonomy-parsing code to fix #4.

smdabdoub commented 6 years ago

Everything looks great. There are a few cosmetic changes I will want to make, but I'll do that in another update. Thanks again!